Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC084364.1-201ENST00000551967 1556 ntBASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 IL9RP2-201ENST00000423948 1312 ntBASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 KRT8P23-201ENST00000560090 1207 ntBASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 AP3S2-216ENST00000617003 1561 ntBASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 ACE3P-201ENST00000423435 1973 ntBASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 CICP14-201ENST00000629111 2732 ntBASIC15.74■□□□□ 0.11
SLC44A1Q8WWI5 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 CICP11-201ENST00000434745 2827 ntBASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 FAM58CP-201ENST00000435741 640 ntBASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 AL591424.1-201ENST00000442569 1213 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms