Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDH19Q8TAB3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.21■□□□□ 0.18
PCDH19Q8TAB3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
PCDH19Q8TAB3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 AC087499.5-201ENST00000452760 1342 ntBASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 AL158211.3-201ENST00000607385 239 ntBASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 AL109936.8-201ENST00000641772 604 ntBASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH19Q8TAB3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 AC126365.1-201ENST00000578585 1514 ntBASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 AC084364.1-201ENST00000551967 1556 ntBASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 AL590560.3-201ENST00000623350 461 ntBASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 AC100757.3-201ENST00000622361 1406 ntBASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDH19Q8TAB3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 TNRC18P2-201ENST00000417666 2714 ntBASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms