Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 KRT18P1-202ENST00000452408 1331 ntBASIC11.79□□□□□ -0.52
NUP35Q8NFH5 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 ACE3P-201ENST00000423435 1973 ntBASIC11.78□□□□□ -0.52
NUP35Q8NFH5 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 PPIH-202ENST00000372549 327 ntTSL 3 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 ARTN-206ENST00000472435 402 ntTSL 3 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 AP002469.2-201ENST00000531724 424 ntBASIC11.78□□□□□ -0.52
NUP35Q8NFH5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 AC005363.2-201ENST00000618631 242 ntBASIC11.78□□□□□ -0.52
NUP35Q8NFH5 AC004706.3-202ENST00000621574 984 ntBASIC11.78□□□□□ -0.52
NUP35Q8NFH5 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NUP35Q8NFH5 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.77□□□□□ -0.52
NUP35Q8NFH5 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
NUP35Q8NFH5 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.77□□□□□ -0.52
NUP35Q8NFH5 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
NUP35Q8NFH5 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NUP35Q8NFH5 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
NUP35Q8NFH5 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NUP35Q8NFH5 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC11.77□□□□□ -0.52
NUP35Q8NFH5 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC11.77□□□□□ -0.52
NUP35Q8NFH5 MTHFR-210ENST00000641407 2387 ntBASIC11.77□□□□□ -0.52
NUP35Q8NFH5 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
NUP35Q8NFH5 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
NUP35Q8NFH5 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC11.77□□□□□ -0.52
NUP35Q8NFH5 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.77□□□□□ -0.52
NUP35Q8NFH5 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
NUP35Q8NFH5 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
NUP35Q8NFH5 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NUP35Q8NFH5 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
NUP35Q8NFH5 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
NUP35Q8NFH5 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NUP35Q8NFH5 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NUP35Q8NFH5 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
NUP35Q8NFH5 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
NUP35Q8NFH5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NUP35Q8NFH5 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NUP35Q8NFH5 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NUP35Q8NFH5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC11.77□□□□□ -0.53
NUP35Q8NFH5 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.77□□□□□ -0.53
NUP35Q8NFH5 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.77□□□□□ -0.53
NUP35Q8NFH5 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
NUP35Q8NFH5 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC11.77□□□□□ -0.53
NUP35Q8NFH5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC11.77□□□□□ -0.53
NUP35Q8NFH5 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC11.77□□□□□ -0.53
NUP35Q8NFH5 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms