Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC3A1Q07837 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.22□□□□□ -0.13
SLC3A1Q07837 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC3A1Q07837 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC3A1Q07837 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC3A1Q07837 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC3A1Q07837 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC3A1Q07837 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC3A1Q07837 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC3A1Q07837 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC3A1Q07837 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC3A1Q07837 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC3A1Q07837 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC3A1Q07837 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC3A1Q07837 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC3A1Q07837 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
SLC3A1Q07837 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC3A1Q07837 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC3A1Q07837 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC3A1Q07837 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC3A1Q07837 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC3A1Q07837 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC3A1Q07837 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC3A1Q07837 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SLC3A1Q07837 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC3A1Q07837 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC3A1Q07837 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SLC3A1Q07837 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC3A1Q07837 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC3A1Q07837 HTR5BP-201ENST00000430851 1154 ntBASIC14.21□□□□□ -0.13
SLC3A1Q07837 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC3A1Q07837 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC3A1Q07837 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC3A1Q07837 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC3A1Q07837 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SLC3A1Q07837 AL365330.1-201ENST00000607459 531 ntBASIC14.21□□□□□ -0.13
SLC3A1Q07837 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC3A1Q07837 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
SLC3A1Q07837 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC3A1Q07837 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC3A1Q07837 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC3A1Q07837 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SLC3A1Q07837 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC3A1Q07837 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.21□□□□□ -0.14
SLC3A1Q07837 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC3A1Q07837 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC3A1Q07837 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC3A1Q07837 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC3A1Q07837 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC3A1Q07837 CICP23-201ENST00000605013 2741 ntBASIC14.2□□□□□ -0.14
SLC3A1Q07837 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC3A1Q07837 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC3A1Q07837 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC3A1Q07837 PMS2P4-201ENST00000412466 1052 ntBASIC14.2□□□□□ -0.14
SLC3A1Q07837 FAM58CP-201ENST00000435741 640 ntBASIC14.2□□□□□ -0.14
SLC3A1Q07837 AC245100.5-201ENST00000452108 331 ntBASIC14.2□□□□□ -0.14
SLC3A1Q07837 AC004967.1-201ENST00000453589 447 ntBASIC14.2□□□□□ -0.14
SLC3A1Q07837 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC3A1Q07837 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 AL691403.2-201ENST00000618460 490 ntBASIC14.2□□□□□ -0.14
SLC3A1Q07837 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC3A1Q07837 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC3A1Q07837 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 AC026748.1-201ENST00000624349 3251 ntBASIC14.2□□□□□ -0.14
SLC3A1Q07837 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.2□□□□□ -0.14
SLC3A1Q07837 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC3A1Q07837 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC3A1Q07837 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC3A1Q07837 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC3A1Q07837 AC134407.2-201ENST00000625089 1978 ntBASIC14.2□□□□□ -0.14
SLC3A1Q07837 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC3A1Q07837 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC3A1Q07837 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC3A1Q07837 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC3A1Q07837 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC3A1Q07837 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC3A1Q07837 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
SLC3A1Q07837 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
SLC3A1Q07837 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms