Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LSP1P33241 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LSP1P33241 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LSP1P33241 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LSP1P33241 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LSP1P33241 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LSP1P33241 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LSP1P33241 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LSP1P33241 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LSP1P33241 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSP1P33241 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSP1P33241 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSP1P33241 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LSP1P33241 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSP1P33241 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSP1P33241 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSP1P33241 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSP1P33241 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSP1P33241 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
LSP1P33241 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSP1P33241 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSP1P33241 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.81■□□□□ 0.12
LSP1P33241 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSP1P33241 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LSP1P33241 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.81■□□□□ 0.12
LSP1P33241 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.81■□□□□ 0.12
LSP1P33241 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSP1P33241 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.81■□□□□ 0.12
LSP1P33241 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSP1P33241 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LSP1P33241 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.81■□□□□ 0.12
LSP1P33241 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.81■□□□□ 0.12
LSP1P33241 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LSP1P33241 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LSP1P33241 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
LSP1P33241 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
LSP1P33241 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSP1P33241 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.81■□□□□ 0.12
LSP1P33241 AC012569.1-201ENST00000591191 1524 ntBASIC15.81■□□□□ 0.12
LSP1P33241 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.81■□□□□ 0.12
LSP1P33241 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.81■□□□□ 0.12
LSP1P33241 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSP1P33241 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSP1P33241 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSP1P33241 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.81■□□□□ 0.12
LSP1P33241 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.8■□□□□ 0.12
LSP1P33241 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.8■□□□□ 0.12
LSP1P33241 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.8■□□□□ 0.12
LSP1P33241 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.8■□□□□ 0.12
LSP1P33241 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.8■□□□□ 0.12
LSP1P33241 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 CHCHD2P8-201ENST00000429873 447 ntBASIC15.8■□□□□ 0.12
LSP1P33241 KRT17P6-201ENST00000453795 1220 ntBASIC15.8■□□□□ 0.12
LSP1P33241 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 AP002469.2-201ENST00000531724 424 ntBASIC15.8■□□□□ 0.12
LSP1P33241 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LSP1P33241 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.8■□□□□ 0.12
LSP1P33241 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.8■□□□□ 0.12
LSP1P33241 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.8■□□□□ 0.12
LSP1P33241 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
LSP1P33241 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.8■□□□□ 0.12
LSP1P33241 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LSP1P33241 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSP1P33241 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.79■□□□□ 0.12
LSP1P33241 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LSP1P33241 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LSP1P33241 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LSP1P33241 AC018529.2-202ENST00000611482 3087 ntBASIC15.79■□□□□ 0.12
LSP1P33241 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSP1P33241 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LSP1P33241 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LSP1P33241 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
LSP1P33241 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSP1P33241 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms