Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CTGFP29279 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTGFP29279 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CTGFP29279 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
CTGFP29279 MIR6842-201ENST00000612539 65 ntBASIC17.33■□□□□ 0.36
CTGFP29279 COX6A1P2-201ENST00000620597 330 ntBASIC17.33■□□□□ 0.36
CTGFP29279 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
CTGFP29279 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTGFP29279 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTGFP29279 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTGFP29279 AC055811.4-201ENST00000624039 1754 ntBASIC17.33■□□□□ 0.36
CTGFP29279 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.33■□□□□ 0.36
CTGFP29279 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.32■□□□□ 0.36
CTGFP29279 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.32■□□□□ 0.36
CTGFP29279 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTGFP29279 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTGFP29279 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTGFP29279 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.32■□□□□ 0.36
CTGFP29279 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTGFP29279 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTGFP29279 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTGFP29279 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
CTGFP29279 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTGFP29279 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTGFP29279 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC17.32■□□□□ 0.36
CTGFP29279 RPL18P13-201ENST00000478088 569 ntBASIC17.32■□□□□ 0.36
CTGFP29279 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.32■□□□□ 0.36
CTGFP29279 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.32■□□□□ 0.36
CTGFP29279 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.32■□□□□ 0.36
CTGFP29279 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.32■□□□□ 0.36
CTGFP29279 PGAM1P5-201ENST00000548011 764 ntBASIC17.32■□□□□ 0.36
CTGFP29279 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.32■□□□□ 0.36
CTGFP29279 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.32■□□□□ 0.36
CTGFP29279 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.32■□□□□ 0.36
CTGFP29279 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.32■□□□□ 0.36
CTGFP29279 MIR4754-201ENST00000582477 89 ntBASIC17.32■□□□□ 0.36
CTGFP29279 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.32■□□□□ 0.36
CTGFP29279 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.32■□□□□ 0.36
CTGFP29279 WT1-AS_6.1-201ENST00000614919 121 ntBASIC17.32■□□□□ 0.36
CTGFP29279 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTGFP29279 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTGFP29279 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTGFP29279 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTGFP29279 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.32■□□□□ 0.36
CTGFP29279 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CTGFP29279 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CTGFP29279 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.31■□□□□ 0.36
CTGFP29279 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.31■□□□□ 0.36
CTGFP29279 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CTGFP29279 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC17.31■□□□□ 0.36
CTGFP29279 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CTGFP29279 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.31■□□□□ 0.36
CTGFP29279 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.31■□□□□ 0.36
CTGFP29279 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.31■□□□□ 0.36
CTGFP29279 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.31■□□□□ 0.36
CTGFP29279 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.31■□□□□ 0.36
CTGFP29279 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.31■□□□□ 0.36
CTGFP29279 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 AL353637.1-201ENST00000451571 732 ntBASIC17.31■□□□□ 0.36
CTGFP29279 PTK2-225ENST00000520892 571 ntTSL 4 BASIC17.31■□□□□ 0.36
CTGFP29279 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.31■□□□□ 0.36
CTGFP29279 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.31■□□□□ 0.36
CTGFP29279 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.31■□□□□ 0.36
CTGFP29279 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.31■□□□□ 0.36
CTGFP29279 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CTGFP29279 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CTGFP29279 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTGFP29279 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTGFP29279 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTGFP29279 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTGFP29279 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTGFP29279 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTGFP29279 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTGFP29279 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms