Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP11P24347 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.92□□□□□ -0.02
MMP11P24347 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP11P24347 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP11P24347 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.92□□□□□ -0.02
MMP11P24347 AL513477.1-201ENST00000602865 2407 ntBASIC14.92□□□□□ -0.02
MMP11P24347 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
MMP11P24347 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP11P24347 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.92□□□□□ -0.02
MMP11P24347 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MMP11P24347 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.92□□□□□ -0.02
MMP11P24347 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.92□□□□□ -0.02
MMP11P24347 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
MMP11P24347 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MMP11P24347 MEIS3P1-201ENST00000495167 958 ntBASIC14.92□□□□□ -0.02
MMP11P24347 AC011495.1-201ENST00000498085 584 ntBASIC14.92□□□□□ -0.02
MMP11P24347 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.92□□□□□ -0.02
MMP11P24347 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.92□□□□□ -0.02
MMP11P24347 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.92□□□□□ -0.02
MMP11P24347 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MMP11P24347 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.92□□□□□ -0.02
MMP11P24347 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.92□□□□□ -0.02
MMP11P24347 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP11P24347 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MMP11P24347 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MMP11P24347 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
MMP11P24347 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP11P24347 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP11P24347 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
MMP11P24347 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
MMP11P24347 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MMP11P24347 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP11P24347 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
MMP11P24347 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP11P24347 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP11P24347 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP11P24347 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.92□□□□□ -0.02
MMP11P24347 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.92□□□□□ -0.02
MMP11P24347 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
MMP11P24347 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP11P24347 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
MMP11P24347 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP11P24347 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP11P24347 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.92□□□□□ -0.02
MMP11P24347 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.92□□□□□ -0.02
MMP11P24347 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
MMP11P24347 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP11P24347 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP11P24347 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.91□□□□□ -0.02
MMP11P24347 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.91□□□□□ -0.02
MMP11P24347 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
MMP11P24347 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP11P24347 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP11P24347 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.91□□□□□ -0.02
MMP11P24347 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP11P24347 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MMP11P24347 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MMP11P24347 AP001282.1-201ENST00000531301 1499 ntBASIC14.91□□□□□ -0.02
MMP11P24347 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.91□□□□□ -0.02
MMP11P24347 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
MMP11P24347 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP11P24347 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.91□□□□□ -0.02
MMP11P24347 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.91□□□□□ -0.02
MMP11P24347 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP11P24347 RN7SL752P-201ENST00000463779 287 ntBASIC14.91□□□□□ -0.02
MMP11P24347 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.91□□□□□ -0.02
MMP11P24347 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.91□□□□□ -0.02
MMP11P24347 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.91□□□□□ -0.02
MMP11P24347 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.91□□□□□ -0.02
MMP11P24347 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.91□□□□□ -0.02
MMP11P24347 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MMP11P24347 AC093726.1-201ENST00000608064 963 ntBASIC14.91□□□□□ -0.02
MMP11P24347 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP11P24347 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MMP11P24347 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP11P24347 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP11P24347 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP11P24347 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MMP11P24347 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MMP11P24347 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MMP11P24347 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP11P24347 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.91□□□□□ -0.02
MMP11P24347 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP11P24347 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.91□□□□□ -0.02
MMP11P24347 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP11P24347 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.91□□□□□ -0.02
MMP11P24347 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
MMP11P24347 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP11P24347 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.91□□□□□ -0.02
MMP11P24347 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP11P24347 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP11P24347 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP11P24347 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP11P24347 BNIP3P1-202ENST00000550043 1585 ntBASIC14.9□□□□□ -0.02
MMP11P24347 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP11P24347 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.9□□□□□ -0.02
MMP11P24347 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
MMP11P24347 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP11P24347 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.9□□□□□ -0.02
MMP11P24347 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms