Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HMX3A6NHT5 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMX3A6NHT5 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMX3A6NHT5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.71□□□□□ -0.21
HMX3A6NHT5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HMX3A6NHT5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HMX3A6NHT5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HMX3A6NHT5 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMX3A6NHT5 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HMX3A6NHT5 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMX3A6NHT5 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
HMX3A6NHT5 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMX3A6NHT5 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.71□□□□□ -0.21
HMX3A6NHT5 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMX3A6NHT5 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HMX3A6NHT5 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HMX3A6NHT5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.71□□□□□ -0.22
HMX3A6NHT5 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.71□□□□□ -0.22
HMX3A6NHT5 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
HMX3A6NHT5 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
HMX3A6NHT5 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
HMX3A6NHT5 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
HMX3A6NHT5 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HMX3A6NHT5 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMX3A6NHT5 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HMX3A6NHT5 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HMX3A6NHT5 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMX3A6NHT5 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMX3A6NHT5 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HMX3A6NHT5 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HMX3A6NHT5 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMX3A6NHT5 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMX3A6NHT5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HMX3A6NHT5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HMX3A6NHT5 FAM8A3P-201ENST00000427218 844 ntBASIC13.7□□□□□ -0.22
HMX3A6NHT5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMX3A6NHT5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMX3A6NHT5 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMX3A6NHT5 AC118758.2-201ENST00000614242 2813 ntBASIC13.7□□□□□ -0.22
HMX3A6NHT5 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMX3A6NHT5 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMX3A6NHT5 PMPCAP1-201ENST00000508114 1576 ntBASIC13.7□□□□□ -0.22
HMX3A6NHT5 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMX3A6NHT5 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HMX3A6NHT5 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 AL139385.1-201ENST00000611744 3272 ntBASIC13.7□□□□□ -0.22
HMX3A6NHT5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HMX3A6NHT5 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMX3A6NHT5 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMX3A6NHT5 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMX3A6NHT5 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMX3A6NHT5 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMX3A6NHT5 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HMX3A6NHT5 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.69□□□□□ -0.22
HMX3A6NHT5 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMX3A6NHT5 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HMX3A6NHT5 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMX3A6NHT5 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HMX3A6NHT5 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HMX3A6NHT5 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.69□□□□□ -0.22
HMX3A6NHT5 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
HMX3A6NHT5 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMX3A6NHT5 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HMX3A6NHT5 AC148477.5-201ENST00000625164 1645 ntBASIC13.69□□□□□ -0.22
HMX3A6NHT5 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HMX3A6NHT5 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMX3A6NHT5 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMX3A6NHT5 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
HMX3A6NHT5 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HMX3A6NHT5 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HMX3A6NHT5 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms