Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 ALOX12P2-203ENST00000570921 1945 ntBASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 KLF2P4-201ENST00000451959 1225 ntBASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 AC068587.3-201ENST00000526613 355 ntBASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 AC068418.2-201ENST00000577309 3703 ntBASIC15.37■□□□□ 0.05
CSNK1G3Q9Y6M4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms