Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 AC142086.2-201ENST00000569753 217 ntBASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 AC079602.3-201ENST00000623931 403 ntBASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 AC113367.3-201ENST00000508316 1912 ntBASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 TKT-202ENST00000423516 2075 ntTSL 2 BASIC11.95□□□□□ -0.5
TRAPPC1Q9Y5R8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 SIGLEC30P-201ENST00000455569 941 ntBASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 C1QBPP2-201ENST00000528754 825 ntBASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 AC105206.1-202ENST00000314927 2368 ntBASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 AC131009.4-201ENST00000624048 1740 ntBASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAPPC1Q9Y5R8 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.93□□□□□ -0.5
TRAPPC1Q9Y5R8 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAPPC1Q9Y5R8 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRAPPC1Q9Y5R8 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
TRAPPC1Q9Y5R8 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAPPC1Q9Y5R8 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms