Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 CYP51A1P2-201ENST00000419457 1499 ntBASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 FGD5P1-202ENST00000614866 2498 ntBASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 CD99-202ENST00000381180 530 ntTSL 2 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 FGFR3P6-201ENST00000457012 610 ntBASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 MIR193BHG-211ENST00000641433 5365 ntBASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 USP3-204ENST00000540797 5474 ntTSL 2 BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SND1-IT1Q9HBX3 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms