Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 NPPA-201ENST00000376476 728 ntTSL 3 BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 IGF1-203ENST00000392904 761 ntTSL 5 BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 DUX4L47-201ENST00000566374 394 ntBASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP4Q9C0A0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 PARVG-202ENST00000415224 999 ntTSL 2 BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 HLA-K-203ENST00000430151 1046 ntBASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 AC021723.1-201ENST00000486306 515 ntBASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 EID1-202ENST00000560490 584 ntTSL 3 BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 MIR4783-201ENST00000580343 82 ntBASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 AC004466.1-201ENST00000599515 1080 ntBASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 AC018635.2-201ENST00000608625 364 ntBASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP4Q9C0A0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 AC055811.4-201ENST00000624039 1754 ntBASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 EEF1DP6-201ENST00000449232 372 ntBASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 RNMTL1P1-201ENST00000454103 560 ntBASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 MARK2P5-201ENST00000507649 634 ntBASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms