Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RHBDF1Q96CC6 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RHBDF1Q96CC6 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.32■□□□□ 0.04
RHBDF1Q96CC6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RHBDF1Q96CC6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RHBDF1Q96CC6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RHBDF1Q96CC6 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RHBDF1Q96CC6 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.32■□□□□ 0.04
RHBDF1Q96CC6 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RHBDF1Q96CC6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.32■□□□□ 0.04
RHBDF1Q96CC6 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.32■□□□□ 0.04
RHBDF1Q96CC6 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RHBDF1Q96CC6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 AC051619.7-201ENST00000568314 623 ntBASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 AC025048.3-201ENST00000590609 569 ntBASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 AC005702.4-201ENST00000618393 416 ntBASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 AC126365.1-201ENST00000578585 1514 ntBASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.31■□□□□ 0.04
RHBDF1Q96CC6 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 KLF2P3-201ENST00000451977 1087 ntBASIC15.3■□□□□ 0.04
RHBDF1Q96CC6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms