Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 AC093028.1-201ENST00000622998 982 ntBASIC15.13■□□□□ 0.01
UBE2E3Q969T4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2E3Q969T4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 SDHAP3-202ENST00000515467 728 ntBASIC15.12■□□□□ 0.01
UBE2E3Q969T4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 AC025048.3-201ENST00000590609 569 ntBASIC15.12■□□□□ 0.01
UBE2E3Q969T4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 AC005702.4-201ENST00000618393 416 ntBASIC15.12■□□□□ 0.01
UBE2E3Q969T4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 AL161772.1-201ENST00000610494 4412 ntBASIC15.12■□□□□ 0.01
UBE2E3Q969T4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 AC087499.5-201ENST00000452760 1342 ntBASIC15.12■□□□□ 0.01
UBE2E3Q969T4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
UBE2E3Q969T4 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.11■□□□□ 0.01
UBE2E3Q969T4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2E3Q969T4 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2E3Q969T4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2E3Q969T4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2E3Q969T4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2E3Q969T4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2E3Q969T4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2E3Q969T4 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
UBE2E3Q969T4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
UBE2E3Q969T4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2E3Q969T4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2E3Q969T4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.11■□□□□ 0.01
UBE2E3Q969T4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2E3Q969T4 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.11■□□□□ 0.01
UBE2E3Q969T4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.11■□□□□ 0.01
UBE2E3Q969T4 METTL21AP1-201ENST00000438852 635 ntBASIC15.11■□□□□ 0.01
UBE2E3Q969T4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.11■□□□□ 0.01
UBE2E3Q969T4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms