Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.9□□□□□ -0.02
TM9SF4Q92544 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TM9SF4Q92544 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TM9SF4Q92544 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.9□□□□□ -0.02
TM9SF4Q92544 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.9□□□□□ -0.02
TM9SF4Q92544 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TM9SF4Q92544 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.89□□□□□ -0.03
TM9SF4Q92544 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.89□□□□□ -0.03
TM9SF4Q92544 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TM9SF4Q92544 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TM9SF4Q92544 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.89□□□□□ -0.03
TM9SF4Q92544 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.89□□□□□ -0.03
TM9SF4Q92544 SLC7A15P-201ENST00000424028 1363 ntBASIC14.89□□□□□ -0.03
TM9SF4Q92544 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.89□□□□□ -0.03
TM9SF4Q92544 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TM9SF4Q92544 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.89□□□□□ -0.03
TM9SF4Q92544 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TM9SF4Q92544 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.89□□□□□ -0.03
TM9SF4Q92544 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 MEIS3P1-201ENST00000495167 958 ntBASIC14.89□□□□□ -0.03
TM9SF4Q92544 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.89□□□□□ -0.03
TM9SF4Q92544 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.89□□□□□ -0.03
TM9SF4Q92544 IGHV3-71-201ENST00000523324 359 ntBASIC14.89□□□□□ -0.03
TM9SF4Q92544 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.89□□□□□ -0.03
TM9SF4Q92544 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.89□□□□□ -0.03
TM9SF4Q92544 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 AC007431.3-201ENST00000623221 587 ntBASIC14.89□□□□□ -0.03
TM9SF4Q92544 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.89□□□□□ -0.03
TM9SF4Q92544 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.89□□□□□ -0.03
TM9SF4Q92544 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.89□□□□□ -0.03
TM9SF4Q92544 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.89□□□□□ -0.03
TM9SF4Q92544 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
TM9SF4Q92544 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.89□□□□□ -0.03
TM9SF4Q92544 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TM9SF4Q92544 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.89□□□□□ -0.03
TM9SF4Q92544 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.89□□□□□ -0.03
TM9SF4Q92544 AL512652.2-201ENST00000625156 1716 ntBASIC14.89□□□□□ -0.03
TM9SF4Q92544 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TM9SF4Q92544 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF4Q92544 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF4Q92544 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF4Q92544 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF4Q92544 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF4Q92544 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF4Q92544 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF4Q92544 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF4Q92544 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF4Q92544 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF4Q92544 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF4Q92544 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF4Q92544 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF4Q92544 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 DGCR5-201ENST00000399539 862 ntBASIC14.88□□□□□ -0.03
TM9SF4Q92544 ARSEP1-201ENST00000420443 635 ntBASIC14.88□□□□□ -0.03
TM9SF4Q92544 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF4Q92544 INE1-201ENST00000456273 945 ntBASIC14.88□□□□□ -0.03
TM9SF4Q92544 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF4Q92544 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF4Q92544 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 AC008494.3-201ENST00000606615 944 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms