Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 CNN2P2-201ENST00000443536 909 ntBASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 CNN2P3-201ENST00000450201 906 ntBASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 AC004449.1-201ENST00000564240 433 ntBASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 AL136317.3-201ENST00000618497 906 ntBASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 MIR6069-201ENST00000620069 79 ntBASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.47□□□□□ -0.41
TTC9CQ8N5M4 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 SSR4P1-203ENST00000599569 2260 ntBASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 AL139400.1-201ENST00000366220 510 ntBASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 SERBP1P3-201ENST00000459980 809 ntBASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 AC015911.4-201ENST00000588022 1070 ntBASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 AP001160.2-201ENST00000596071 487 ntBASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TTC9CQ8N5M4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
TTC9CQ8N5M4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
TTC9CQ8N5M4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TTC9CQ8N5M4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TTC9CQ8N5M4 AC090616.6-203ENST00000579186 1945 ntBASIC12.46□□□□□ -0.42
TTC9CQ8N5M4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
TTC9CQ8N5M4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TTC9CQ8N5M4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
TTC9CQ8N5M4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms