Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 AC092552.1-201ENST00000547243 906 ntBASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PHTF2Q8N3S3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PHTF2Q8N3S3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
PHTF2Q8N3S3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PHTF2Q8N3S3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PHTF2Q8N3S3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.27■□□□□ 0.19
PHTF2Q8N3S3 AC073347.1-201ENST00000421633 2643 ntBASIC16.27■□□□□ 0.19
PHTF2Q8N3S3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PHTF2Q8N3S3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PHTF2Q8N3S3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.27■□□□□ 0.19
PHTF2Q8N3S3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PHTF2Q8N3S3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.27■□□□□ 0.19
PHTF2Q8N3S3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PHTF2Q8N3S3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PHTF2Q8N3S3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 RN7SL399P-201ENST00000471648 279 ntBASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 CLK3P2-201ENST00000427566 1453 ntBASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
PHTF2Q8N3S3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 AC006449.6-201ENST00000612330 2296 ntBASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms