Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 TTTY23B-201ENST00000442790 549 ntBASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 AC133539.2-201ENST00000604757 467 ntBASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCN4BQ8IWT1 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 AL359711.2-201ENST00000563105 872 ntBASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 AL049840.4-201ENST00000602422 811 ntBASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCN4BQ8IWT1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 AL513523.2-202ENST00000427283 2040 ntBASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 AC134915.1-201ENST00000426461 574 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms