Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.11■□□□□ 0.01
RAB43Q86YS6 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RAB43Q86YS6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB43Q86YS6 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB43Q86YS6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB43Q86YS6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB43Q86YS6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB43Q86YS6 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB43Q86YS6 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB43Q86YS6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB43Q86YS6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB43Q86YS6 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB43Q86YS6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB43Q86YS6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB43Q86YS6 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RAB43Q86YS6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB43Q86YS6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB43Q86YS6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB43Q86YS6 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB43Q86YS6 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB43Q86YS6 AC005622.1-201ENST00000636801 1703 ntBASIC15.1■□□□□ 0.01
RAB43Q86YS6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB43Q86YS6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB43Q86YS6 SPDYE19P-201ENST00000338590 713 ntBASIC15.1■□□□□ 0.01
RAB43Q86YS6 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB43Q86YS6 MEP1AP4-201ENST00000423244 1087 ntBASIC15.1■□□□□ 0.01
RAB43Q86YS6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB43Q86YS6 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.1■□□□□ 0.01
RAB43Q86YS6 AC114501.2-201ENST00000439631 535 ntBASIC15.1■□□□□ 0.01
RAB43Q86YS6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB43Q86YS6 API5-211ENST00000534695 560 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB43Q86YS6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB43Q86YS6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.1■□□□□ 0.01
RAB43Q86YS6 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB43Q86YS6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB43Q86YS6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB43Q86YS6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB43Q86YS6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB43Q86YS6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB43Q86YS6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB43Q86YS6 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB43Q86YS6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB43Q86YS6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB43Q86YS6 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB43Q86YS6 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB43Q86YS6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB43Q86YS6 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB43Q86YS6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB43Q86YS6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB43Q86YS6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB43Q86YS6 AC138969.3-201ENST00000546612 1459 ntBASIC15.09■□□□□ 0.01
RAB43Q86YS6 AC138932.2-201ENST00000548268 1459 ntBASIC15.09■□□□□ 0.01
RAB43Q86YS6 AC126755.4-201ENST00000549796 1459 ntBASIC15.09■□□□□ 0.01
RAB43Q86YS6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB43Q86YS6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB43Q86YS6 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB43Q86YS6 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB43Q86YS6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB43Q86YS6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB43Q86YS6 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB43Q86YS6 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB43Q86YS6 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB43Q86YS6 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 AP006294.1-201ENST00000415407 339 ntBASIC15.09■□□□□ 0.01
RAB43Q86YS6 GNAQP1-201ENST00000444815 1067 ntBASIC15.09■□□□□ 0.01
RAB43Q86YS6 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 AC055876.2-201ENST00000531834 546 ntBASIC15.09■□□□□ 0.01
RAB43Q86YS6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB43Q86YS6 MIR4321-201ENST00000592276 80 ntBASIC15.09■□□□□ 0.01
RAB43Q86YS6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB43Q86YS6 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.09■□□□□ 0.01
RAB43Q86YS6 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB43Q86YS6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB43Q86YS6 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB43Q86YS6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 GGT3P-204ENST00000453783 1664 ntBASIC15.09■□□□□ 0.01
RAB43Q86YS6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB43Q86YS6 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB43Q86YS6 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB43Q86YS6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms