Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 AC027601.5-201ENST00000624065 2482 ntBASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 HAUS4P1-201ENST00000406739 1145 ntBASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP4Q6PIL6 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 AC011477.6-201ENST00000604980 1927 ntBASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms