Protein–RNA interactions for Protein: Q02223

TNFRSF17, Tumor necrosis factor receptor superfamily member 17, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17Q02223 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 MIR770-201ENST00000390219 98 ntBASIC14.82□□□□□ -0.04
TNFRSF17Q02223 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 AC092337.1-201ENST00000568699 1129 ntBASIC14.82□□□□□ -0.04
TNFRSF17Q02223 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 AC004840.1-201ENST00000636359 365 ntBASIC14.82□□□□□ -0.04
TNFRSF17Q02223 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF17Q02223 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 MRPS18AP1-201ENST00000414458 589 ntBASIC14.81□□□□□ -0.04
TNFRSF17Q02223 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 RNA5SP421-201ENST00000516864 134 ntBASIC14.81□□□□□ -0.04
TNFRSF17Q02223 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 AC135586.1-201ENST00000539323 574 ntBASIC14.81□□□□□ -0.04
TNFRSF17Q02223 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 AC023824.1-201ENST00000562945 2975 ntBASIC14.81□□□□□ -0.04
TNFRSF17Q02223 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFRSF17Q02223 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF17Q02223 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.8□□□□□ -0.04
TNFRSF17Q02223 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF17Q02223 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TNFRSF17Q02223 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.8□□□□□ -0.04
TNFRSF17Q02223 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF17Q02223 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TNFRSF17Q02223 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF17Q02223 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF17Q02223 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 155.1 ms