Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SRPXP78539 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SRPXP78539 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SRPXP78539 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SRPXP78539 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SRPXP78539 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SRPXP78539 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SRPXP78539 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.01□□□□□ -0.33
SRPXP78539 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.01□□□□□ -0.33
SRPXP78539 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.01□□□□□ -0.33
SRPXP78539 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SRPXP78539 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.01□□□□□ -0.33
SRPXP78539 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.01□□□□□ -0.33
SRPXP78539 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.01□□□□□ -0.33
SRPXP78539 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SRPXP78539 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.01□□□□□ -0.33
SRPXP78539 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.01□□□□□ -0.33
SRPXP78539 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
SRPXP78539 AC105339.3-201ENST00000560043 636 ntBASIC13.01□□□□□ -0.33
SRPXP78539 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.01□□□□□ -0.33
SRPXP78539 AC004790.2-201ENST00000623588 572 ntBASIC13.01□□□□□ -0.33
SRPXP78539 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SRPXP78539 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
SRPXP78539 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.01□□□□□ -0.33
SRPXP78539 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SRPXP78539 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
SRPXP78539 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRPXP78539 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SRPXP78539 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
SRPXP78539 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SRPXP78539 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
SRPXP78539 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13□□□□□ -0.33
SRPXP78539 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
SRPXP78539 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13□□□□□ -0.33
SRPXP78539 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13□□□□□ -0.33
SRPXP78539 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 AL691432.1-201ENST00000596308 1422 ntBASIC13□□□□□ -0.33
SRPXP78539 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13□□□□□ -0.33
SRPXP78539 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13□□□□□ -0.33
SRPXP78539 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13□□□□□ -0.33
SRPXP78539 AC004987.2-201ENST00000395959 1148 ntBASIC13□□□□□ -0.33
SRPXP78539 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13□□□□□ -0.33
SRPXP78539 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13□□□□□ -0.33
SRPXP78539 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13□□□□□ -0.33
SRPXP78539 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13□□□□□ -0.33
SRPXP78539 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13□□□□□ -0.33
SRPXP78539 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13□□□□□ -0.33
SRPXP78539 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13□□□□□ -0.33
SRPXP78539 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SRPXP78539 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13□□□□□ -0.33
SRPXP78539 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SRPXP78539 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13□□□□□ -0.33
SRPXP78539 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
SRPXP78539 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms