Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.78■□□□□ 0.12
AP1S1P61966 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S1P61966 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S1P61966 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.78■□□□□ 0.12
AP1S1P61966 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
AP1S1P61966 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.78■□□□□ 0.12
AP1S1P61966 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S1P61966 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S1P61966 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.78■□□□□ 0.12
AP1S1P61966 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S1P61966 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S1P61966 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S1P61966 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S1P61966 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.78■□□□□ 0.12
AP1S1P61966 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.77■□□□□ 0.12
AP1S1P61966 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S1P61966 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
AP1S1P61966 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S1P61966 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S1P61966 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S1P61966 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.77■□□□□ 0.12
AP1S1P61966 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.77■□□□□ 0.12
AP1S1P61966 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.77■□□□□ 0.12
AP1S1P61966 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S1P61966 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
AP1S1P61966 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S1P61966 AC092850.2-201ENST00000623821 2697 ntBASIC15.77■□□□□ 0.12
AP1S1P61966 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S1P61966 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.77■□□□□ 0.12
AP1S1P61966 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S1P61966 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S1P61966 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S1P61966 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S1P61966 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
AP1S1P61966 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
AP1S1P61966 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
AP1S1P61966 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S1P61966 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.77■□□□□ 0.12
AP1S1P61966 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.77■□□□□ 0.12
AP1S1P61966 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S1P61966 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.77■□□□□ 0.12
AP1S1P61966 RPL13AP25-201ENST00000484130 612 ntBASIC15.77■□□□□ 0.12
AP1S1P61966 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
AP1S1P61966 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.77■□□□□ 0.12
AP1S1P61966 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S1P61966 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S1P61966 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.77■□□□□ 0.12
AP1S1P61966 CHCHD2P3-201ENST00000603038 451 ntBASIC15.77■□□□□ 0.12
AP1S1P61966 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.77■□□□□ 0.12
AP1S1P61966 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.77■□□□□ 0.12
AP1S1P61966 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
AP1S1P61966 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S1P61966 AC084364.1-201ENST00000551967 1556 ntBASIC15.77■□□□□ 0.11
AP1S1P61966 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
AP1S1P61966 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.77■□□□□ 0.11
AP1S1P61966 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP1S1P61966 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
AP1S1P61966 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP1S1P61966 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.77■□□□□ 0.11
AP1S1P61966 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP1S1P61966 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.77■□□□□ 0.11
AP1S1P61966 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
AP1S1P61966 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.77■□□□□ 0.11
AP1S1P61966 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.77■□□□□ 0.11
AP1S1P61966 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
AP1S1P61966 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S1P61966 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S1P61966 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S1P61966 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.76■□□□□ 0.11
AP1S1P61966 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S1P61966 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.76■□□□□ 0.11
AP1S1P61966 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S1P61966 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S1P61966 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S1P61966 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.76■□□□□ 0.11
AP1S1P61966 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S1P61966 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.76■□□□□ 0.11
AP1S1P61966 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S1P61966 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.76■□□□□ 0.11
AP1S1P61966 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S1P61966 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.76■□□□□ 0.11
AP1S1P61966 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S1P61966 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.76■□□□□ 0.11
AP1S1P61966 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S1P61966 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.76■□□□□ 0.11
AP1S1P61966 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.76■□□□□ 0.11
AP1S1P61966 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.76■□□□□ 0.11
AP1S1P61966 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.76■□□□□ 0.11
AP1S1P61966 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S1P61966 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.76■□□□□ 0.11
AP1S1P61966 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
AP1S1P61966 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
AP1S1P61966 AL139384.1-201ENST00000612143 3047 ntBASIC15.76■□□□□ 0.11
AP1S1P61966 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.76■□□□□ 0.11
AP1S1P61966 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S1P61966 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.76■□□□□ 0.11
AP1S1P61966 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S1P61966 AC090616.6-203ENST00000579186 1945 ntBASIC15.76■□□□□ 0.11
AP1S1P61966 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.76■□□□□ 0.11
AP1S1P61966 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms