Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.57□□□□□ -0.24
AP3S2P59780 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.57□□□□□ -0.24
AP3S2P59780 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S2P59780 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.57□□□□□ -0.24
AP3S2P59780 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.57□□□□□ -0.24
AP3S2P59780 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
AP3S2P59780 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S2P59780 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.57□□□□□ -0.24
AP3S2P59780 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S2P59780 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
AP3S2P59780 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S2P59780 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S2P59780 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S2P59780 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S2P59780 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.57□□□□□ -0.24
AP3S2P59780 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.57□□□□□ -0.24
AP3S2P59780 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S2P59780 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S2P59780 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S2P59780 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S2P59780 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.56□□□□□ -0.24
AP3S2P59780 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S2P59780 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.56□□□□□ -0.24
AP3S2P59780 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S2P59780 AL359881.3-201ENST00000602640 1721 ntBASIC13.56□□□□□ -0.24
AP3S2P59780 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S2P59780 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S2P59780 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.56□□□□□ -0.24
AP3S2P59780 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.56□□□□□ -0.24
AP3S2P59780 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.56□□□□□ -0.24
AP3S2P59780 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.56□□□□□ -0.24
AP3S2P59780 TERF1P1-201ENST00000311003 1181 ntBASIC13.56□□□□□ -0.24
AP3S2P59780 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
AP3S2P59780 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S2P59780 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
AP3S2P59780 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S2P59780 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.56□□□□□ -0.24
AP3S2P59780 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.56□□□□□ -0.24
AP3S2P59780 AP002469.2-201ENST00000531724 424 ntBASIC13.56□□□□□ -0.24
AP3S2P59780 MIR4321-201ENST00000592276 80 ntBASIC13.56□□□□□ -0.24
AP3S2P59780 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.56□□□□□ -0.24
AP3S2P59780 AC005363.2-201ENST00000618631 242 ntBASIC13.56□□□□□ -0.24
AP3S2P59780 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.56□□□□□ -0.24
AP3S2P59780 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S2P59780 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S2P59780 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S2P59780 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
AP3S2P59780 AC010327.5-201ENST00000586923 3061 ntBASIC13.56□□□□□ -0.24
AP3S2P59780 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.56□□□□□ -0.24
AP3S2P59780 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S2P59780 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.56□□□□□ -0.24
AP3S2P59780 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
AP3S2P59780 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S2P59780 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.56□□□□□ -0.24
AP3S2P59780 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S2P59780 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.56□□□□□ -0.24
AP3S2P59780 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S2P59780 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S2P59780 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.56□□□□□ -0.24
AP3S2P59780 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.56□□□□□ -0.24
AP3S2P59780 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.56□□□□□ -0.24
AP3S2P59780 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S2P59780 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S2P59780 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S2P59780 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S2P59780 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.55□□□□□ -0.24
AP3S2P59780 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
AP3S2P59780 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S2P59780 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S2P59780 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S2P59780 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S2P59780 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S2P59780 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
AP3S2P59780 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S2P59780 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S2P59780 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.55□□□□□ -0.24
AP3S2P59780 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S2P59780 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S2P59780 HSPA7-201ENST00000445535 1927 ntBASIC13.55□□□□□ -0.24
AP3S2P59780 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S2P59780 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S2P59780 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S2P59780 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S2P59780 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.55□□□□□ -0.24
AP3S2P59780 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S2P59780 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
AP3S2P59780 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.55□□□□□ -0.24
AP3S2P59780 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.55□□□□□ -0.24
AP3S2P59780 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.55□□□□□ -0.24
AP3S2P59780 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.55□□□□□ -0.24
AP3S2P59780 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.55□□□□□ -0.24
AP3S2P59780 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.55□□□□□ -0.24
AP3S2P59780 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.55□□□□□ -0.24
AP3S2P59780 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
AP3S2P59780 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.55□□□□□ -0.24
AP3S2P59780 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.55□□□□□ -0.24
AP3S2P59780 AL139288.1-201ENST00000623748 933 ntBASIC13.55□□□□□ -0.24
AP3S2P59780 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.55□□□□□ -0.24
AP3S2P59780 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.55□□□□□ -0.24
AP3S2P59780 AL805961.1-202ENST00000641562 540 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms