Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SHC1P29353 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SHC1P29353 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 RPL37AP1-201ENST00000412502 279 ntBASIC14.47□□□□□ -0.09
SHC1P29353 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
SHC1P29353 AL079307.3-201ENST00000556114 283 ntBASIC14.47□□□□□ -0.09
SHC1P29353 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.47□□□□□ -0.09
SHC1P29353 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 AC005498.2-205ENST00000593218 784 ntBASIC14.47□□□□□ -0.09
SHC1P29353 AL589739.1-201ENST00000607720 493 ntBASIC14.47□□□□□ -0.09
SHC1P29353 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SHC1P29353 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.47□□□□□ -0.09
SHC1P29353 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.47□□□□□ -0.09
SHC1P29353 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.47□□□□□ -0.09
SHC1P29353 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SHC1P29353 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.47□□□□□ -0.09
SHC1P29353 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.47□□□□□ -0.09
SHC1P29353 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.46□□□□□ -0.09
SHC1P29353 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
SHC1P29353 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHC1P29353 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SHC1P29353 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SHC1P29353 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.46□□□□□ -0.09
SHC1P29353 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHC1P29353 AC006486.2-201ENST00000624246 2199 ntBASIC14.46□□□□□ -0.09
SHC1P29353 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHC1P29353 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.46□□□□□ -0.09
SHC1P29353 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.46□□□□□ -0.09
SHC1P29353 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SHC1P29353 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHC1P29353 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHC1P29353 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SHC1P29353 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHC1P29353 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SHC1P29353 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHC1P29353 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.46□□□□□ -0.09
SHC1P29353 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.46□□□□□ -0.09
SHC1P29353 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.46□□□□□ -0.09
SHC1P29353 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.46□□□□□ -0.09
SHC1P29353 AL080243.2-201ENST00000418783 582 ntBASIC14.46□□□□□ -0.09
SHC1P29353 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHC1P29353 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SHC1P29353 AC097493.3-201ENST00000509725 367 ntBASIC14.46□□□□□ -0.09
SHC1P29353 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SHC1P29353 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.46□□□□□ -0.09
SHC1P29353 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.46□□□□□ -0.09
SHC1P29353 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.46□□□□□ -0.09
SHC1P29353 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SHC1P29353 AC073592.8-201ENST00000624126 511 ntBASIC14.46□□□□□ -0.09
SHC1P29353 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHC1P29353 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.46□□□□□ -0.09
SHC1P29353 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SHC1P29353 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.46□□□□□ -0.09
SHC1P29353 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SHC1P29353 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHC1P29353 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHC1P29353 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHC1P29353 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.46□□□□□ -0.09
SHC1P29353 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.46□□□□□ -0.09
SHC1P29353 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.46□□□□□ -0.1
SHC1P29353 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.46□□□□□ -0.1
SHC1P29353 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHC1P29353 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHC1P29353 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
SHC1P29353 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHC1P29353 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
SHC1P29353 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.46□□□□□ -0.1
SHC1P29353 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHC1P29353 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SHC1P29353 CETN4P-206ENST00000642099 2168 ntBASIC14.46□□□□□ -0.1
SHC1P29353 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHC1P29353 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
SHC1P29353 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SHC1P29353 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHC1P29353 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHC1P29353 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHC1P29353 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHC1P29353 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHC1P29353 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHC1P29353 AP001282.1-201ENST00000531301 1499 ntBASIC14.45□□□□□ -0.1
SHC1P29353 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHC1P29353 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHC1P29353 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SHC1P29353 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHC1P29353 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.45□□□□□ -0.1
SHC1P29353 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms