Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.18■□□□□ 0.18
ERCC2P18074 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC2P18074 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.18■□□□□ 0.18
ERCC2P18074 AC004840.1-201ENST00000636359 365 ntBASIC16.18■□□□□ 0.18
ERCC2P18074 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC2P18074 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC2P18074 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC2P18074 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
ERCC2P18074 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC2P18074 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
ERCC2P18074 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC2P18074 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC2P18074 AC126177.1-201ENST00000547829 2218 ntBASIC16.18■□□□□ 0.18
ERCC2P18074 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC2P18074 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC2P18074 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC2P18074 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC2P18074 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC2P18074 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC2P18074 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC2P18074 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ERCC2P18074 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC2P18074 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC2P18074 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.17■□□□□ 0.18
ERCC2P18074 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC2P18074 BTBD7P1-201ENST00000447253 1453 ntBASIC16.17■□□□□ 0.18
ERCC2P18074 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.17■□□□□ 0.18
ERCC2P18074 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC2P18074 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.17■□□□□ 0.18
ERCC2P18074 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC2P18074 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC2P18074 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.17■□□□□ 0.18
ERCC2P18074 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.17■□□□□ 0.18
ERCC2P18074 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.17■□□□□ 0.18
ERCC2P18074 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC2P18074 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.17■□□□□ 0.18
ERCC2P18074 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC2P18074 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC2P18074 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC2P18074 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC2P18074 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC2P18074 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC2P18074 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.17■□□□□ 0.18
ERCC2P18074 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC2P18074 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.17■□□□□ 0.18
ERCC2P18074 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC2P18074 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC2P18074 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC2P18074 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
ERCC2P18074 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC2P18074 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC2P18074 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC2P18074 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.16■□□□□ 0.18
ERCC2P18074 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ERCC2P18074 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC2P18074 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC2P18074 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC2P18074 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.16■□□□□ 0.18
ERCC2P18074 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC2P18074 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC2P18074 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC2P18074 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.16■□□□□ 0.18
ERCC2P18074 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
ERCC2P18074 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC2P18074 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC2P18074 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.16■□□□□ 0.18
ERCC2P18074 TOMM22P5-201ENST00000416399 439 ntBASIC16.16■□□□□ 0.18
ERCC2P18074 FAM8A3P-201ENST00000427218 844 ntBASIC16.16■□□□□ 0.18
ERCC2P18074 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.16■□□□□ 0.18
ERCC2P18074 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.16■□□□□ 0.18
ERCC2P18074 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC2P18074 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC2P18074 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC2P18074 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC2P18074 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.16■□□□□ 0.18
ERCC2P18074 AC112693.3-201ENST00000624819 1983 ntBASIC16.16■□□□□ 0.18
ERCC2P18074 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC2P18074 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC2P18074 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC2P18074 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC2P18074 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ERCC2P18074 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.16■□□□□ 0.18
ERCC2P18074 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ERCC2P18074 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC2P18074 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC2P18074 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.16■□□□□ 0.18
ERCC2P18074 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
ERCC2P18074 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
ERCC2P18074 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
ERCC2P18074 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.15■□□□□ 0.18
ERCC2P18074 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.15■□□□□ 0.18
ERCC2P18074 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ERCC2P18074 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.15■□□□□ 0.18
ERCC2P18074 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms