Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 AC006504.5-208ENST00000588784 2401 ntBASIC11.88□□□□□ -0.51
LTAP01374 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
LTAP01374 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
LTAP01374 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
LTAP01374 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
LTAP01374 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
LTAP01374 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.87□□□□□ -0.51
LTAP01374 ACE3P-201ENST00000423435 1973 ntBASIC11.87□□□□□ -0.51
LTAP01374 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.87□□□□□ -0.51
LTAP01374 C8orf49-201ENST00000525043 1968 ntBASIC11.87□□□□□ -0.51
LTAP01374 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
LTAP01374 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 ABR-228ENST00000574437 3196 ntTSL 5 BASIC11.87□□□□□ -0.51
LTAP01374 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
LTAP01374 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 AKR1C7P-201ENST00000305623 895 ntBASIC11.87□□□□□ -0.51
LTAP01374 RPL5P21-201ENST00000404620 815 ntBASIC11.87□□□□□ -0.51
LTAP01374 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC11.87□□□□□ -0.51
LTAP01374 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC11.87□□□□□ -0.51
LTAP01374 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 TSPY19P-201ENST00000418461 509 ntBASIC11.87□□□□□ -0.51
LTAP01374 TSPY18P-201ENST00000441642 509 ntBASIC11.87□□□□□ -0.51
LTAP01374 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC11.87□□□□□ -0.51
LTAP01374 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC11.87□□□□□ -0.51
LTAP01374 AC073648.2-201ENST00000510116 352 ntBASIC11.87□□□□□ -0.51
LTAP01374 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC11.87□□□□□ -0.51
LTAP01374 AC091304.2-201ENST00000564639 760 ntBASIC11.87□□□□□ -0.51
LTAP01374 AC024267.1-201ENST00000582320 895 ntBASIC11.87□□□□□ -0.51
LTAP01374 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC11.87□□□□□ -0.51
LTAP01374 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC11.87□□□□□ -0.51
LTAP01374 CLEC4GP1-201ENST00000596555 870 ntBASIC11.87□□□□□ -0.51
LTAP01374 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC11.87□□□□□ -0.51
LTAP01374 AL358472.4-201ENST00000633140 710 ntBASIC11.87□□□□□ -0.51
LTAP01374 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
LTAP01374 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.87□□□□□ -0.51
LTAP01374 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.87□□□□□ -0.51
LTAP01374 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC11.87□□□□□ -0.51
LTAP01374 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC11.87□□□□□ -0.51
LTAP01374 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC11.87□□□□□ -0.51
LTAP01374 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC11.87□□□□□ -0.51
LTAP01374 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC11.87□□□□□ -0.51
LTAP01374 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.87□□□□□ -0.51
LTAP01374 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
LTAP01374 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LTAP01374 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
LTAP01374 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
LTAP01374 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
LTAP01374 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC11.86□□□□□ -0.51
LTAP01374 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.86□□□□□ -0.51
LTAP01374 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC11.86□□□□□ -0.51
LTAP01374 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
LTAP01374 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC11.86□□□□□ -0.51
LTAP01374 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
LTAP01374 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC11.86□□□□□ -0.51
LTAP01374 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms