Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 IER3-202ENST00000376377 1350 ntBASIC14.6□□□□□ -0.07
CLIC3O95833 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.6□□□□□ -0.07
CLIC3O95833 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.6□□□□□ -0.07
CLIC3O95833 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.59□□□□□ -0.07
CLIC3O95833 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.59□□□□□ -0.07
CLIC3O95833 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CLIC3O95833 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
CLIC3O95833 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
CLIC3O95833 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.59□□□□□ -0.07
CLIC3O95833 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.59□□□□□ -0.07
CLIC3O95833 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 CICP17-201ENST00000418553 2377 ntBASIC14.59□□□□□ -0.07
CLIC3O95833 HSPA7-201ENST00000445535 1927 ntBASIC14.59□□□□□ -0.07
CLIC3O95833 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CLIC3O95833 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CLIC3O95833 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CLIC3O95833 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 AL031133.1-201ENST00000406807 723 ntBASIC14.59□□□□□ -0.07
CLIC3O95833 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.59□□□□□ -0.07
CLIC3O95833 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.59□□□□□ -0.07
CLIC3O95833 AP002469.2-201ENST00000531724 424 ntBASIC14.59□□□□□ -0.07
CLIC3O95833 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
CLIC3O95833 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.59□□□□□ -0.07
CLIC3O95833 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.59□□□□□ -0.07
CLIC3O95833 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.59□□□□□ -0.07
CLIC3O95833 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.59□□□□□ -0.07
CLIC3O95833 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.59□□□□□ -0.07
CLIC3O95833 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CLIC3O95833 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC3O95833 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CLIC3O95833 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CLIC3O95833 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.58□□□□□ -0.07
CLIC3O95833 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
CLIC3O95833 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CLIC3O95833 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CLIC3O95833 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.58□□□□□ -0.07
CLIC3O95833 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CLIC3O95833 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLIC3O95833 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
CLIC3O95833 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.58□□□□□ -0.08
CLIC3O95833 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLIC3O95833 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CLIC3O95833 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLIC3O95833 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLIC3O95833 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CLIC3O95833 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLIC3O95833 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLIC3O95833 PCED1CP-201ENST00000419887 785 ntBASIC14.58□□□□□ -0.08
CLIC3O95833 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.58□□□□□ -0.08
CLIC3O95833 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLIC3O95833 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.58□□□□□ -0.08
CLIC3O95833 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.58□□□□□ -0.08
CLIC3O95833 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.58□□□□□ -0.08
CLIC3O95833 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.58□□□□□ -0.08
CLIC3O95833 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.58□□□□□ -0.08
CLIC3O95833 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.58□□□□□ -0.08
CLIC3O95833 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.58□□□□□ -0.08
CLIC3O95833 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CLIC3O95833 MTDHP4-201ENST00000600287 670 ntBASIC14.58□□□□□ -0.08
CLIC3O95833 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CLIC3O95833 AL031055.1-201ENST00000606362 631 ntBASIC14.58□□□□□ -0.08
CLIC3O95833 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.58□□□□□ -0.08
CLIC3O95833 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.58□□□□□ -0.08
CLIC3O95833 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.58□□□□□ -0.08
CLIC3O95833 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLIC3O95833 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CLIC3O95833 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLIC3O95833 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CLIC3O95833 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLIC3O95833 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.58□□□□□ -0.08
CLIC3O95833 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CLIC3O95833 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLIC3O95833 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLIC3O95833 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.58□□□□□ -0.08
CLIC3O95833 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLIC3O95833 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLIC3O95833 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms