Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 AC006504.5-208ENST00000588784 2401 ntBASIC11.49□□□□□ -0.57
TNFRSF6BO95407 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 AP002469.2-201ENST00000531724 424 ntBASIC11.49□□□□□ -0.57
TNFRSF6BO95407 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 AC099336.1-202ENST00000602961 463 ntBASIC11.49□□□□□ -0.57
TNFRSF6BO95407 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 LINC01230-201ENST00000625222 3017 ntBASIC11.49□□□□□ -0.57
TNFRSF6BO95407 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TNFRSF6BO95407 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 FLII-221ENST00000578558 2377 ntTSL 5 BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 CICP14-201ENST00000629111 2732 ntBASIC11.48□□□□□ -0.57
TNFRSF6BO95407 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 AL645939.2-201ENST00000427340 991 ntBASIC11.48□□□□□ -0.57
TNFRSF6BO95407 AC132008.2-207ENST00000454517 770 ntBASIC11.48□□□□□ -0.57
TNFRSF6BO95407 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 AC106795.1-205ENST00000512851 1056 ntBASIC11.48□□□□□ -0.57
TNFRSF6BO95407 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 MED25-212ENST00000618715 1467 ntTSL 5 BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TNFRSF6BO95407 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms