Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.05■□□□□ -0
GFRA3O60609 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
GFRA3O60609 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
GFRA3O60609 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
GFRA3O60609 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
GFRA3O60609 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.04■□□□□ -0
GFRA3O60609 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
GFRA3O60609 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
GFRA3O60609 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.04■□□□□ -0
GFRA3O60609 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
GFRA3O60609 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
GFRA3O60609 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.04■□□□□ -0
GFRA3O60609 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
GFRA3O60609 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.04■□□□□ -0
GFRA3O60609 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
GFRA3O60609 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.04■□□□□ -0
GFRA3O60609 AC004554.1-201ENST00000422830 1468 ntBASIC15.04■□□□□ -0
GFRA3O60609 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
GFRA3O60609 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.04■□□□□ -0
GFRA3O60609 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC15.04■□□□□ -0
GFRA3O60609 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.04■□□□□ -0
GFRA3O60609 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.04■□□□□ -0
GFRA3O60609 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC15.04■□□□□ -0
GFRA3O60609 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC15.04■□□□□ -0
GFRA3O60609 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC15.04■□□□□ -0
GFRA3O60609 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC15.04■□□□□ -0
GFRA3O60609 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC15.04■□□□□ -0
GFRA3O60609 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.04■□□□□ -0
GFRA3O60609 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC15.04■□□□□ -0
GFRA3O60609 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.04■□□□□ -0
GFRA3O60609 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.04■□□□□ -0
GFRA3O60609 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.04■□□□□ -0
GFRA3O60609 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
GFRA3O60609 MIR4472-1-201ENST00000584349 80 ntBASIC15.04■□□□□ -0
GFRA3O60609 AL132994.2-201ENST00000603120 687 ntBASIC15.04■□□□□ -0
GFRA3O60609 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
GFRA3O60609 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.04■□□□□ -0
GFRA3O60609 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
GFRA3O60609 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.04■□□□□ -0
GFRA3O60609 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
GFRA3O60609 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.04■□□□□ -0
GFRA3O60609 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
GFRA3O60609 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
GFRA3O60609 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
GFRA3O60609 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.03■□□□□ -0
GFRA3O60609 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GFRA3O60609 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.03■□□□□ -0
GFRA3O60609 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
GFRA3O60609 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
GFRA3O60609 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
GFRA3O60609 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
GFRA3O60609 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
GFRA3O60609 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.03■□□□□ -0
GFRA3O60609 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
GFRA3O60609 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
GFRA3O60609 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
GFRA3O60609 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GFRA3O60609 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
GFRA3O60609 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GFRA3O60609 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GFRA3O60609 COX20P1-201ENST00000366529 357 ntBASIC15.03■□□□□ -0
GFRA3O60609 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GFRA3O60609 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.03■□□□□ -0
GFRA3O60609 KRT17P4-201ENST00000429445 819 ntBASIC15.03■□□□□ -0
GFRA3O60609 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC15.03■□□□□ -0
GFRA3O60609 AC245100.5-201ENST00000452108 331 ntBASIC15.03■□□□□ -0
GFRA3O60609 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15.03■□□□□ -0
GFRA3O60609 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.03■□□□□ -0
GFRA3O60609 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC15.03■□□□□ -0
GFRA3O60609 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC15.03■□□□□ -0
GFRA3O60609 AC100827.2-201ENST00000563214 1194 ntBASIC15.03■□□□□ -0
GFRA3O60609 AC026803.1-201ENST00000569130 274 ntBASIC15.03■□□□□ -0
GFRA3O60609 SNORD3B-2-202ENST00000571722 791 ntBASIC15.03■□□□□ -0
GFRA3O60609 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC15.03■□□□□ -0
GFRA3O60609 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.03■□□□□ -0
GFRA3O60609 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC15.03■□□□□ -0
GFRA3O60609 AC005972.3-201ENST00000606304 481 ntBASIC15.03■□□□□ -0
GFRA3O60609 AC021016.3-201ENST00000608367 477 ntBASIC15.03■□□□□ -0
GFRA3O60609 AC010503.4-201ENST00000615487 688 ntBASIC15.03■□□□□ -0
GFRA3O60609 AL162426.1-201ENST00000624141 743 ntBASIC15.03■□□□□ -0
GFRA3O60609 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GFRA3O60609 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.03■□□□□ -0
GFRA3O60609 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.03■□□□□ -0
GFRA3O60609 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GFRA3O60609 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
GFRA3O60609 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.03■□□□□ -0
GFRA3O60609 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GFRA3O60609 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.03■□□□□ -0
GFRA3O60609 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
GFRA3O60609 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.03■□□□□ -0
GFRA3O60609 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.03■□□□□ -0
GFRA3O60609 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.03■□□□□ -0
GFRA3O60609 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.03■□□□□ -0
GFRA3O60609 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.03■□□□□ -0
GFRA3O60609 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GFRA3O60609 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GFRA3O60609 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.03■□□□□ -0
GFRA3O60609 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GFRA3O60609 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GFRA3O60609 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms