RNA–Protein interactions for RNA: ENST00000438065.1

LINC00972-202, long intergenic non-protein coding RNA 972, humanhuman

TSL 3 BASIC

Gene LINC00972, Length 788 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00972-202ENST00000438065 AEBP2Q6ZN18 517 aaPredicted RBP39.22■■■■□ 3.87
LINC00972-202ENST00000438065 CHIC1Q5VXU3 224 aa37.68■■■■□ 3.62
LINC00972-202ENST00000438065 SENP3Q9H4L4 574 aaPredicted RBP33.35■■■□□ 2.93
LINC00972-202ENST00000438065 PHF23Q9BUL5 403 aaPredicted RBP33.09■■■□□ 2.89
LINC00972-202ENST00000438065 FOXD1Q16676 465 aa31.04■■■□□ 2.56
LINC00972-202ENST00000438065 PLPPR3Q6T4P5 718 aa30.3■■■□□ 2.44
LINC00972-202ENST00000438065 PPP6R1Q9UPN7 881 aa29.39■■■□□ 2.3
LINC00972-202ENST00000438065 ADRA2BP18089 450 aa29.31■■■□□ 2.28
LINC00972-202ENST00000438065 PIAS4Q8N2W9 510 aaPredicted RBP29.11■■■□□ 2.25
LINC00972-202ENST00000438065 MSH5O43196 834 aa28.9■■■□□ 2.22
LINC00972-202ENST00000438065 POTEDQ86YR6 584 aa27.7■■■□□ 2.02
LINC00972-202ENST00000438065 MAPK8IP2Q13387 824 aaPredicted RBP26.78■■□□□ 1.88
LINC00972-202ENST00000438065 SCAF1Q9H7N4 1312 aaKnown RBP26.77■■□□□ 1.88
LINC00972-202ENST00000438065 PPP4R3CPQ6ZMV5 832 aa26.63■■□□□ 1.85
LINC00972-202ENST00000438065 DMRT2Q9Y5R5 561 aa26.54■■□□□ 1.84
LINC00972-202ENST00000438065 CNKSR2Q8WXI2 1034 aa26.01■■□□□ 1.75
LINC00972-202ENST00000438065 HOXD11P31277 338 aaPredicted RBP25.74■■□□□ 1.71
LINC00972-202ENST00000438065 NCBP3Q53F19 620 aaKnown RBP25.72■■□□□ 1.71
LINC00972-202ENST00000438065 RNF216Q9NWF9 866 aaPredicted RBP25.67■■□□□ 1.7
LINC00972-202ENST00000438065 NPM3O75607 178 aaKnown RBP25.39■■□□□ 1.66
LINC00972-202ENST00000438065 DCAF8L1A6NGE4 600 aa25.37■■□□□ 1.65
LINC00972-202ENST00000438065 KCNA4P22459 653 aa25.33■■□□□ 1.65
LINC00972-202ENST00000438065 DNAJC5BQ9UF47 199 aa24.77■■□□□ 1.56
LINC00972-202ENST00000438065 RNF39Q9H2S5 420 aa24.68■■□□□ 1.54
LINC00972-202ENST00000438065 CACNB1Q02641 598 aaPredicted RBP24.63■■□□□ 1.53
LINC00972-202ENST00000438065 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.49■■□□□ 1.51
LINC00972-202ENST00000438065 C1QBPQ07021 282 aaKnown RBP24.32■■□□□ 1.48
LINC00972-202ENST00000438065 SLC4A2P04920 1241 aa24.14■■□□□ 1.45
LINC00972-202ENST00000438065 U3KPZ7 1027 aaPredicted RBP24.08■■□□□ 1.45
LINC00972-202ENST00000438065 SLC4A1APQ9BWU0 796 aaKnown RBP23.99■■□□□ 1.43
LINC00972-202ENST00000438065 SPINK5Q9NQ38 1064 aaPredicted RBP23.58■■□□□ 1.37
LINC00972-202ENST00000438065 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.51■■□□□ 1.35
LINC00972-202ENST00000438065 HNRNPUL2Q1KMD3 747 aaKnown RBP23.51■■□□□ 1.35
LINC00972-202ENST00000438065 CAPN15O75808 1086 aa23.48■■□□□ 1.35
LINC00972-202ENST00000438065 FOXD4L1Q9NU39 408 aa23.48■■□□□ 1.35
LINC00972-202ENST00000438065 MYCNP04198 464 aaPredicted RBP23.46■■□□□ 1.35
LINC00972-202ENST00000438065 SAMD1Q6SPF0 538 aaPredicted RBP23.41■■□□□ 1.34
LINC00972-202ENST00000438065 APLP2Q06481 763 aa23.4■■□□□ 1.34
LINC00972-202ENST00000438065 ZBTB22O15209 634 aa23.33■■□□□ 1.33
LINC00972-202ENST00000438065 DSG3P32926 999 aa23.26■■□□□ 1.31
LINC00972-202ENST00000438065 TRHP20396 242 aaPredicted RBP23.22■■□□□ 1.31
LINC00972-202ENST00000438065 ZNF219Q9P2Y4 722 aaPredicted RBP23.21■■□□□ 1.31
LINC00972-202ENST00000438065 ABCB7O75027 752 aa23■■□□□ 1.27
LINC00972-202ENST00000438065 ATF5Q9Y2D1 282 aaPredicted RBP22.91■■□□□ 1.26
LINC00972-202ENST00000438065 POLA2Q14181 598 aa22.71■■□□□ 1.23
LINC00972-202ENST00000438065 ATXN8OSP0DMR3 200 aa22.7■■□□□ 1.22
LINC00972-202ENST00000438065 CSRNP3Q8WYN3 585 aa22.65■■□□□ 1.22
LINC00972-202ENST00000438065 EHMT2Q96KQ7 1210 aa22.6■■□□□ 1.21
LINC00972-202ENST00000438065 ZBTB12Q9Y330 459 aaPredicted RBP22.29■■□□□ 1.16
LINC00972-202ENST00000438065 RBM42Q9BTD8 480 aaKnown RBP22.17■■□□□ 1.14
LINC00972-202ENST00000438065 OSCARQ8IYS5 282 aa22■■□□□ 1.11
LINC00972-202ENST00000438065 FBLN2P98095 1184 aa21.93■■□□□ 1.1
LINC00972-202ENST00000438065 MKRN4PQ13434 485 aaPredicted RBP21.89■■□□□ 1.09
LINC00972-202ENST00000438065 POTEHQ6S545 545 aa21.78■■□□□ 1.08
LINC00972-202ENST00000438065 AKT1S1Q96B36 256 aa21.76■■□□□ 1.07
LINC00972-202ENST00000438065 SPDYE2BA6NHP3 402 aa21.65■■□□□ 1.06
LINC00972-202ENST00000438065 SPDYE6P0CI01 402 aa21.65■■□□□ 1.06
LINC00972-202ENST00000438065 SPDYE2Q495Y8 402 aa21.65■■□□□ 1.06
LINC00972-202ENST00000438065 REM2Q8IYK8 340 aaPredicted RBP21.56■■□□□ 1.04
LINC00972-202ENST00000438065 CHRDL2Q6WN34 429 aa21.53■■□□□ 1.04
LINC00972-202ENST00000438065 ZNF692Q9BU19 519 aaPredicted RBP21.45■■□□□ 1.02
LINC00972-202ENST00000438065 SSUH2Q9Y2M2 353 aa21.44■■□□□ 1.02
LINC00972-202ENST00000438065 PITPNM1O00562 1244 aa21.35■■□□□ 1.01
LINC00972-202ENST00000438065 PABPN1Q86U42 306 aaKnown RBP eCLIP21.16■□□□□ 0.98
LINC00972-202ENST00000438065 SPDYE1Q8NFV5 336 aaPredicted RBP21.14■□□□□ 0.97
LINC00972-202ENST00000438065 PIP4P2Q8N4L2 257 aa21.11■□□□□ 0.97
LINC00972-202ENST00000438065 CLEC11AQ9Y240 323 aa21.07■□□□□ 0.96
LINC00972-202ENST00000438065 SPDYE4A6NLX3 237 aa21.06■□□□□ 0.96
LINC00972-202ENST00000438065 FXR2P51116 673 aaKnown RBP eCLIP21.06■□□□□ 0.96
LINC00972-202ENST00000438065 PRR29P0C7W0 189 aa20.79■□□□□ 0.92
LINC00972-202ENST00000438065 PRKAR2AP13861 404 aaKnown RBP20.77■□□□□ 0.92
LINC00972-202ENST00000438065 PROM2Q8N271 834 aa20.68■□□□□ 0.9
LINC00972-202ENST00000438065 STAG3Q9UJ98 1225 aa20.66■□□□□ 0.9
LINC00972-202ENST00000438065 HAX1O00165 279 aa20.64■□□□□ 0.89
LINC00972-202ENST00000438065 CHADLQ6NUI6 762 aa20.64■□□□□ 0.89
LINC00972-202ENST00000438065 SP7Q8TDD2 431 aaPredicted RBP20.55■□□□□ 0.88
LINC00972-202ENST00000438065 FKBP8Q14318 412 aa20.49■□□□□ 0.87
LINC00972-202ENST00000438065 CREBZFQ9NS37 354 aa20.43■□□□□ 0.86
LINC00972-202ENST00000438065 FARP1Q9Y4F1 1045 aaPredicted RBP20.39■□□□□ 0.85
LINC00972-202ENST00000438065 EVX2Q03828 476 aa20.38■□□□□ 0.85
LINC00972-202ENST00000438065 C19orf67A6NJJ6 358 aa20.37■□□□□ 0.85
LINC00972-202ENST00000438065 MNX1P50219 401 aaPredicted RBP20.16■□□□□ 0.82
LINC00972-202ENST00000438065 CD44P16070 742 aaKnown RBP20.15■□□□□ 0.82
LINC00972-202ENST00000438065 NPM1P06748 294 aaKnown RBP eCLIP20.02■□□□□ 0.8
LINC00972-202ENST00000438065 MIER1Q8N108 512 aa20■□□□□ 0.79
LINC00972-202ENST00000438065 GABBR2O75899 941 aa19.93■□□□□ 0.78
LINC00972-202ENST00000438065 PLEKHG5O94827 1062 aa19.93■□□□□ 0.78
LINC00972-202ENST00000438065 ZRANB1Q9UGI0 708 aa19.92■□□□□ 0.78
LINC00972-202ENST00000438065 PLCD3Q8N3E9 789 aa19.91■□□□□ 0.78
LINC00972-202ENST00000438065 FBXO3Q9UK99 471 aa19.91■□□□□ 0.78
LINC00972-202ENST00000438065 ZNF579Q8NAF0 562 aaKnown RBP19.88■□□□□ 0.77
LINC00972-202ENST00000438065 PAK3O75914 559 aaPredicted RBP19.84■□□□□ 0.77
LINC00972-202ENST00000438065 CLCN6P51797 869 aa19.76■□□□□ 0.75
LINC00972-202ENST00000438065 ZBTB47Q9UFB7 747 aaPredicted RBP19.73■□□□□ 0.75
LINC00972-202ENST00000438065 PHF12Q96QT6 1004 aa19.72■□□□□ 0.75
LINC00972-202ENST00000438065 VASPP50552 380 aaPredicted RBP19.7■□□□□ 0.74
LINC00972-202ENST00000438065 TSPYL2Q9H2G4 693 aaPredicted RBP19.69■□□□□ 0.74
LINC00972-202ENST00000438065 RASEFQ8IZ41 740 aa19.68■□□□□ 0.74
LINC00972-202ENST00000438065 CCDC61Q9Y6R9 512 aa19.62■□□□□ 0.73
LINC00972-202ENST00000438065 NUBP1P53384 320 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms