Protein–RNA interactions for Protein: F8W1W9

NPIPB9, Nuclear pore complex-interacting protein family member B9, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9F8W1W9 KRT18P43-201ENST00000469825 1281 ntBASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 AC000095.1-201ENST00000603208 874 ntBASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 AC004840.1-201ENST00000636359 365 ntBASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB9F8W1W9 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 AC006058.4-201ENST00000624016 1670 ntBASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB9F8W1W9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
NPIPB9F8W1W9 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NPIPB9F8W1W9 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
NPIPB9F8W1W9 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NPIPB9F8W1W9 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NPIPB9F8W1W9 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.33□□□□□ -0.11
NPIPB9F8W1W9 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB9F8W1W9 TCAF2P1-201ENST00000291129 2421 ntBASIC14.33□□□□□ -0.12
NPIPB9F8W1W9 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB9F8W1W9 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB9F8W1W9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB9F8W1W9 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB9F8W1W9 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB9F8W1W9 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NPIPB9F8W1W9 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NPIPB9F8W1W9 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
NPIPB9F8W1W9 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB9F8W1W9 AC148477.4-201ENST00000613430 1793 ntBASIC14.33□□□□□ -0.12
NPIPB9F8W1W9 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NPIPB9F8W1W9 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.33□□□□□ -0.12
NPIPB9F8W1W9 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NPIPB9F8W1W9 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.33□□□□□ -0.12
NPIPB9F8W1W9 CYMP-203ENST00000474680 1263 ntBASIC14.33□□□□□ -0.12
NPIPB9F8W1W9 SPDYE18-201ENST00000510091 1050 ntBASIC14.33□□□□□ -0.12
NPIPB9F8W1W9 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.33□□□□□ -0.12
NPIPB9F8W1W9 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.33□□□□□ -0.12
NPIPB9F8W1W9 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB9F8W1W9 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
NPIPB9F8W1W9 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms