Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 FLJ16779-201ENST00000612722 7638 ntBASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 AC105250.1-201ENST00000509378 2057 ntBASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 PAUPAR-201ENST00000630360 2965 ntBASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 AC092127.1-201ENST00000567093 3455 ntBASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 TOMM22P5-201ENST00000416399 439 ntBASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 AC092337.1-201ENST00000568699 1129 ntBASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.15□□□□□ -0.14
HDGFL3Q9Y3E1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 PKD1P5-201ENST00000532415 10291 ntBASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 AC135586.1-201ENST00000539323 574 ntBASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms