Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.4□□□□□ -0.26
UBQLN2Q9UHD9 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBQLN2Q9UHD9 PPT1-213ENST00000641319 2388 ntBASIC13.4□□□□□ -0.26
UBQLN2Q9UHD9 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.4□□□□□ -0.26
UBQLN2Q9UHD9 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBQLN2Q9UHD9 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.4□□□□□ -0.26
UBQLN2Q9UHD9 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBQLN2Q9UHD9 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBQLN2Q9UHD9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.4□□□□□ -0.26
UBQLN2Q9UHD9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBQLN2Q9UHD9 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBQLN2Q9UHD9 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
UBQLN2Q9UHD9 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
UBQLN2Q9UHD9 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 AC092135.3-201ENST00000624151 1846 ntBASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 AC096633.1-201ENST00000422446 749 ntBASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 DRAXINP1-201ENST00000437611 948 ntBASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 RN7SL606P-201ENST00000472779 293 ntBASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 DUX4L17-201ENST00000557360 1267 ntBASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 PGM5P2-202ENST00000637225 1043 ntBASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 AC233702.3-201ENST00000578656 1387 ntBASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 AL135999.2-201ENST00000622438 1686 ntBASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBQLN2Q9UHD9 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.38□□□□□ -0.27
UBQLN2Q9UHD9 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBQLN2Q9UHD9 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
UBQLN2Q9UHD9 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
UBQLN2Q9UHD9 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
UBQLN2Q9UHD9 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.38□□□□□ -0.27
UBQLN2Q9UHD9 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBQLN2Q9UHD9 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UBQLN2Q9UHD9 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.38□□□□□ -0.27
UBQLN2Q9UHD9 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBQLN2Q9UHD9 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
UBQLN2Q9UHD9 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UBQLN2Q9UHD9 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.38□□□□□ -0.27
UBQLN2Q9UHD9 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBQLN2Q9UHD9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBQLN2Q9UHD9 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
UBQLN2Q9UHD9 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
UBQLN2Q9UHD9 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
UBQLN2Q9UHD9 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBQLN2Q9UHD9 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
UBQLN2Q9UHD9 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UBQLN2Q9UHD9 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms