Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 GNAQP1-201ENST00000444815 1067 ntBASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 AL589987.1-201ENST00000453380 819 ntBASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 AC140912.1-201ENST00000577171 1054 ntBASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 PRAL-201ENST00000624952 3286 ntBASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM62Q9BVG3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 RN7SL399P-201ENST00000471648 279 ntBASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM62Q9BVG3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM62Q9BVG3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TRIM62Q9BVG3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM62Q9BVG3 AC020658.6-201ENST00000623564 1870 ntBASIC16.33■□□□□ 0.21
TRIM62Q9BVG3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
TRIM62Q9BVG3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.33■□□□□ 0.21
TRIM62Q9BVG3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM62Q9BVG3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms