Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
CASD1Q96PB1 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CASD1Q96PB1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CASD1Q96PB1 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.59■□□□□ 0.25
CASD1Q96PB1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.59■□□□□ 0.25
CASD1Q96PB1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASD1Q96PB1 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CASD1Q96PB1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CASD1Q96PB1 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.59■□□□□ 0.25
CASD1Q96PB1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CASD1Q96PB1 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CASD1Q96PB1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.59■□□□□ 0.25
CASD1Q96PB1 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASD1Q96PB1 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CASD1Q96PB1 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.59■□□□□ 0.25
CASD1Q96PB1 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASD1Q96PB1 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CASD1Q96PB1 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.59■□□□□ 0.25
CASD1Q96PB1 RPSAP36-202ENST00000494591 1261 ntBASIC16.59■□□□□ 0.25
CASD1Q96PB1 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.59■□□□□ 0.25
CASD1Q96PB1 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.59■□□□□ 0.25
CASD1Q96PB1 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.59■□□□□ 0.25
CASD1Q96PB1 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.59■□□□□ 0.25
CASD1Q96PB1 AP001258.2-201ENST00000529891 490 ntBASIC16.59■□□□□ 0.25
CASD1Q96PB1 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.59■□□□□ 0.25
CASD1Q96PB1 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.59■□□□□ 0.25
CASD1Q96PB1 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.59■□□□□ 0.25
CASD1Q96PB1 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CASD1Q96PB1 AC005695.3-201ENST00000614522 232 ntBASIC16.59■□□□□ 0.25
CASD1Q96PB1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CASD1Q96PB1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
CASD1Q96PB1 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASD1Q96PB1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASD1Q96PB1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASD1Q96PB1 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASD1Q96PB1 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.59■□□□□ 0.25
CASD1Q96PB1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CASD1Q96PB1 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CASD1Q96PB1 PCDH8P1-201ENST00000428983 2773 ntBASIC16.59■□□□□ 0.25
CASD1Q96PB1 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CASD1Q96PB1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASD1Q96PB1 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CASD1Q96PB1 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CASD1Q96PB1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CASD1Q96PB1 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CASD1Q96PB1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.58■□□□□ 0.25
CASD1Q96PB1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CASD1Q96PB1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CASD1Q96PB1 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.58■□□□□ 0.24
CASD1Q96PB1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
CASD1Q96PB1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CASD1Q96PB1 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.58■□□□□ 0.24
CASD1Q96PB1 TPM3P8-201ENST00000330554 643 ntBASIC16.58■□□□□ 0.24
CASD1Q96PB1 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CASD1Q96PB1 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CASD1Q96PB1 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.58■□□□□ 0.24
CASD1Q96PB1 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CASD1Q96PB1 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.58■□□□□ 0.24
CASD1Q96PB1 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.58■□□□□ 0.24
CASD1Q96PB1 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.58■□□□□ 0.24
CASD1Q96PB1 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.58■□□□□ 0.24
CASD1Q96PB1 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CASD1Q96PB1 AL008638.5-201ENST00000623814 1298 ntBASIC16.58■□□□□ 0.24
CASD1Q96PB1 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.58■□□□□ 0.24
CASD1Q96PB1 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.58■□□□□ 0.24
CASD1Q96PB1 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CASD1Q96PB1 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CASD1Q96PB1 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CASD1Q96PB1 AC007787.1-201ENST00000588095 1583 ntBASIC16.58■□□□□ 0.24
CASD1Q96PB1 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.58■□□□□ 0.24
CASD1Q96PB1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.58■□□□□ 0.24
CASD1Q96PB1 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CASD1Q96PB1 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CASD1Q96PB1 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CASD1Q96PB1 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.58■□□□□ 0.24
CASD1Q96PB1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CASD1Q96PB1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CASD1Q96PB1 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CASD1Q96PB1 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CASD1Q96PB1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.58■□□□□ 0.24
CASD1Q96PB1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CASD1Q96PB1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CASD1Q96PB1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
CASD1Q96PB1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASD1Q96PB1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASD1Q96PB1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASD1Q96PB1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASD1Q96PB1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CASD1Q96PB1 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CASD1Q96PB1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CASD1Q96PB1 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.57■□□□□ 0.24
CASD1Q96PB1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.57■□□□□ 0.24
CASD1Q96PB1 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CASD1Q96PB1 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.57■□□□□ 0.24
CASD1Q96PB1 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASD1Q96PB1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASD1Q96PB1 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.57■□□□□ 0.24
CASD1Q96PB1 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CASD1Q96PB1 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CASD1Q96PB1 AC015818.8-201ENST00000587907 1519 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms