Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.83□□□□□ -0.36
ZNF48Q96MX3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 AL158212.4-201ENST00000624062 1286 ntBASIC12.83□□□□□ -0.36
ZNF48Q96MX3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 AC126755.1-201ENST00000525846 6405 ntBASIC12.83□□□□□ -0.36
ZNF48Q96MX3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 RPL13P2-201ENST00000440687 659 ntBASIC12.82□□□□□ -0.36
ZNF48Q96MX3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 CROCCP4-201ENST00000457096 498 ntBASIC12.82□□□□□ -0.36
ZNF48Q96MX3 RN7SL399P-201ENST00000471648 279 ntBASIC12.82□□□□□ -0.36
ZNF48Q96MX3 AC119751.2-201ENST00000504529 210 ntBASIC12.82□□□□□ -0.36
ZNF48Q96MX3 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 SNX29P1-201ENST00000548357 1007 ntBASIC12.82□□□□□ -0.36
ZNF48Q96MX3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 AC243562.2-201ENST00000561247 970 ntBASIC12.82□□□□□ -0.36
ZNF48Q96MX3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 AC010319.3-201ENST00000597028 470 ntBASIC12.82□□□□□ -0.36
ZNF48Q96MX3 RPSAP52-203ENST00000622976 1023 ntBASIC12.82□□□□□ -0.36
ZNF48Q96MX3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 PCDH8P1-201ENST00000428983 2773 ntBASIC12.82□□□□□ -0.36
ZNF48Q96MX3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ZNF48Q96MX3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 BNIP3P1-202ENST00000550043 1585 ntBASIC12.81□□□□□ -0.36
ZNF48Q96MX3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms