Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM47Q96LD4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
TRIM47Q96LD4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIM47Q96LD4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM47Q96LD4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIM47Q96LD4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM47Q96LD4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM47Q96LD4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM47Q96LD4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 NFIC-211ENST00000641145 8399 ntBASIC18.4■□□□□ 0.54
TRIM47Q96LD4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 AL158212.4-201ENST00000624062 1286 ntBASIC18.4■□□□□ 0.54
TRIM47Q96LD4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM47Q96LD4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
TRIM47Q96LD4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.39■□□□□ 0.54
TRIM47Q96LD4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 CYP4F24P-201ENST00000586049 1580 ntBASIC18.39■□□□□ 0.53
TRIM47Q96LD4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 MIR1247-201ENST00000408206 136 ntBASIC18.39■□□□□ 0.53
TRIM47Q96LD4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 AP000812.2-201ENST00000538934 718 ntBASIC18.39■□□□□ 0.53
TRIM47Q96LD4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 AC243960.2-201ENST00000600996 747 ntBASIC18.39■□□□□ 0.53
TRIM47Q96LD4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM47Q96LD4 Z97205.2-201ENST00000564697 1639 ntBASIC18.38■□□□□ 0.53
TRIM47Q96LD4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 GPAA1P2-202ENST00000606848 1787 ntBASIC18.38■□□□□ 0.53
TRIM47Q96LD4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms