Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 AC023908.3-201ENST00000564211 3047 ntBASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 CICP23-201ENST00000605013 2741 ntBASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 AP001282.1-201ENST00000531301 1499 ntBASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 AC004832.2-201ENST00000426397 482 ntBASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 FAM58CP-201ENST00000435741 640 ntBASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 AP000347.1-202ENST00000435868 847 ntBASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 RARRES2P8-201ENST00000566335 367 ntBASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
RTN4IP1Q8WWV3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 MTDHP5-201ENST00000598980 586 ntBASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms