Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC170Q8IYT3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC170Q8IYT3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC170Q8IYT3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC170Q8IYT3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC170Q8IYT3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC170Q8IYT3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC170Q8IYT3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CCDC170Q8IYT3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCDC170Q8IYT3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 WASH3P-207ENST00000560956 1394 ntBASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 FO538757.1-201ENST00000623083 1397 ntBASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 AC026979.3-201ENST00000607315 403 ntBASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC170Q8IYT3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 AC136604.1-201ENST00000418535 575 ntBASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 AL135744.1-201ENST00000565098 629 ntBASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 AC104109.2-201ENST00000602919 1418 ntBASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms