Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H3F3CQ6NXT2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.58□□□□□ -0.08
H3F3CQ6NXT2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
H3F3CQ6NXT2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.58□□□□□ -0.08
H3F3CQ6NXT2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
H3F3CQ6NXT2 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
H3F3CQ6NXT2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
H3F3CQ6NXT2 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.58□□□□□ -0.08
H3F3CQ6NXT2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H3F3CQ6NXT2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 AL607033.1-201ENST00000623900 1599 ntBASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
H3F3CQ6NXT2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 BRI3BPP1-201ENST00000594224 787 ntBASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 AL162274.1-201ENST00000617191 1098 ntBASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 AL033527.5-201ENST00000641382 801 ntBASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.56□□□□□ -0.08
H3F3CQ6NXT2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
H3F3CQ6NXT2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms