Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.56■□□□□ 0.08
SRP54P61011 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.56■□□□□ 0.08
SRP54P61011 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.56■□□□□ 0.08
SRP54P61011 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.56■□□□□ 0.08
SRP54P61011 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.56■□□□□ 0.08
SRP54P61011 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
SRP54P61011 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.56■□□□□ 0.08
SRP54P61011 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SRP54P61011 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
SRP54P61011 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.55■□□□□ 0.08
SRP54P61011 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SRP54P61011 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.55■□□□□ 0.08
SRP54P61011 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.55■□□□□ 0.08
SRP54P61011 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.55■□□□□ 0.08
SRP54P61011 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.55■□□□□ 0.08
SRP54P61011 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SRP54P61011 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.55■□□□□ 0.08
SRP54P61011 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SRP54P61011 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.55■□□□□ 0.08
SRP54P61011 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SRP54P61011 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.55■□□□□ 0.08
SRP54P61011 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
SRP54P61011 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SRP54P61011 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.55■□□□□ 0.08
SRP54P61011 TOMM22P5-201ENST00000416399 439 ntBASIC15.55■□□□□ 0.08
SRP54P61011 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.55■□□□□ 0.08
SRP54P61011 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.55■□□□□ 0.08
SRP54P61011 U91328.1-201ENST00000437528 223 ntBASIC15.55■□□□□ 0.08
SRP54P61011 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.55■□□□□ 0.08
SRP54P61011 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.55■□□□□ 0.08
SRP54P61011 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.55■□□□□ 0.08
SRP54P61011 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.55■□□□□ 0.08
SRP54P61011 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.55■□□□□ 0.08
SRP54P61011 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.55■□□□□ 0.08
SRP54P61011 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.55■□□□□ 0.08
SRP54P61011 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SRP54P61011 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.55■□□□□ 0.08
SRP54P61011 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SRP54P61011 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
SRP54P61011 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP54P61011 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.55■□□□□ 0.08
SRP54P61011 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SRP54P61011 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
SRP54P61011 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRP54P61011 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.54■□□□□ 0.08
SRP54P61011 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.54■□□□□ 0.08
SRP54P61011 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.54■□□□□ 0.08
SRP54P61011 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRP54P61011 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.54■□□□□ 0.08
SRP54P61011 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.54■□□□□ 0.08
SRP54P61011 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRP54P61011 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SRP54P61011 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRP54P61011 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.54■□□□□ 0.08
SRP54P61011 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SRP54P61011 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms