Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN20P56880 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 SPCS2P1-201ENST00000561636 679 ntBASIC14.49□□□□□ -0.09
CLDN20P56880 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.49□□□□□ -0.09
CLDN20P56880 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.49□□□□□ -0.09
CLDN20P56880 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.49□□□□□ -0.09
CLDN20P56880 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN20P56880 TEX28P1-201ENST00000613479 1221 ntBASIC14.49□□□□□ -0.09
CLDN20P56880 TEX28P2-201ENST00000617764 1221 ntBASIC14.49□□□□□ -0.09
CLDN20P56880 AL590560.3-201ENST00000623350 461 ntBASIC14.49□□□□□ -0.09
CLDN20P56880 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
CLDN20P56880 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CLDN20P56880 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN20P56880 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN20P56880 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
CLDN20P56880 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN20P56880 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CLDN20P56880 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN20P56880 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CLDN20P56880 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.48□□□□□ -0.09
CLDN20P56880 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CLDN20P56880 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN20P56880 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
CLDN20P56880 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN20P56880 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.48□□□□□ -0.09
CLDN20P56880 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CLDN20P56880 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CLDN20P56880 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN20P56880 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.48□□□□□ -0.09
CLDN20P56880 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.48□□□□□ -0.09
CLDN20P56880 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN20P56880 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN20P56880 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.48□□□□□ -0.09
CLDN20P56880 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
CLDN20P56880 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CLDN20P56880 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN20P56880 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN20P56880 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CLDN20P56880 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.48□□□□□ -0.09
CLDN20P56880 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CLDN20P56880 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN20P56880 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN20P56880 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CLDN20P56880 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.48□□□□□ -0.09
CLDN20P56880 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.48□□□□□ -0.09
CLDN20P56880 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN20P56880 BCRP1-201ENST00000444246 691 ntBASIC14.48□□□□□ -0.09
CLDN20P56880 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.48□□□□□ -0.09
CLDN20P56880 RNA5SP421-201ENST00000516864 134 ntBASIC14.48□□□□□ -0.09
CLDN20P56880 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CLDN20P56880 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.48□□□□□ -0.09
CLDN20P56880 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN20P56880 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
CLDN20P56880 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN20P56880 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CLDN20P56880 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.48□□□□□ -0.09
CLDN20P56880 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.48□□□□□ -0.09
CLDN20P56880 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
CLDN20P56880 AL691432.1-201ENST00000596308 1422 ntBASIC14.48□□□□□ -0.09
CLDN20P56880 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CLDN20P56880 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN20P56880 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN20P56880 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN20P56880 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN20P56880 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.48□□□□□ -0.09
CLDN20P56880 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.47□□□□□ -0.09
CLDN20P56880 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.47□□□□□ -0.09
CLDN20P56880 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN20P56880 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN20P56880 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.47□□□□□ -0.09
CLDN20P56880 GRK6P1-201ENST00000400595 1711 ntBASIC14.47□□□□□ -0.09
CLDN20P56880 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 AL359258.3-201ENST00000622910 2331 ntBASIC14.47□□□□□ -0.09
CLDN20P56880 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CLDN20P56880 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.47□□□□□ -0.09
CLDN20P56880 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.47□□□□□ -0.09
CLDN20P56880 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.47□□□□□ -0.09
CLDN20P56880 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms