Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CTGFP29279 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTGFP29279 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
CTGFP29279 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
CTGFP29279 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTGFP29279 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTGFP29279 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTGFP29279 MIR648-201ENST00000385046 94 ntBASIC17.38■□□□□ 0.37
CTGFP29279 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTGFP29279 ISCA2P1-201ENST00000425548 448 ntBASIC17.38■□□□□ 0.37
CTGFP29279 IGLV3-15-201ENST00000518356 244 ntBASIC17.38■□□□□ 0.37
CTGFP29279 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC17.38■□□□□ 0.37
CTGFP29279 RTN3P1-201ENST00000536295 711 ntBASIC17.38■□□□□ 0.37
CTGFP29279 AC135983.4-201ENST00000564116 1262 ntBASIC17.38■□□□□ 0.37
CTGFP29279 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.38■□□□□ 0.37
CTGFP29279 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC17.38■□□□□ 0.37
CTGFP29279 AC138466.3-201ENST00000619983 221 ntBASIC17.38■□□□□ 0.37
CTGFP29279 AC006453.1-201ENST00000636037 1257 ntBASIC17.38■□□□□ 0.37
CTGFP29279 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CTGFP29279 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CTGFP29279 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTGFP29279 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CTGFP29279 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTGFP29279 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTGFP29279 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTGFP29279 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTGFP29279 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.38■□□□□ 0.37
CTGFP29279 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTGFP29279 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CTGFP29279 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTGFP29279 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.37■□□□□ 0.37
CTGFP29279 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTGFP29279 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CTGFP29279 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CTGFP29279 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CTGFP29279 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.37■□□□□ 0.37
CTGFP29279 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.37■□□□□ 0.37
CTGFP29279 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTGFP29279 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CTGFP29279 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTGFP29279 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTGFP29279 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CTGFP29279 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CTGFP29279 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CTGFP29279 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CTGFP29279 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTGFP29279 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTGFP29279 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.37■□□□□ 0.37
CTGFP29279 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTGFP29279 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.37■□□□□ 0.37
CTGFP29279 AC026316.1-201ENST00000398900 414 ntBASIC17.37■□□□□ 0.37
CTGFP29279 GHSR-202ENST00000427970 912 ntBASIC17.37■□□□□ 0.37
CTGFP29279 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CTGFP29279 AC004066.1-201ENST00000502488 802 ntBASIC17.37■□□□□ 0.37
CTGFP29279 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
CTGFP29279 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.37■□□□□ 0.37
CTGFP29279 AC242376.1-201ENST00000559033 726 ntBASIC17.37■□□□□ 0.37
CTGFP29279 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.37■□□□□ 0.37
CTGFP29279 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.37■□□□□ 0.37
CTGFP29279 AC103691.2-201ENST00000618824 433 ntBASIC17.37■□□□□ 0.37
CTGFP29279 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CTGFP29279 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTGFP29279 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTGFP29279 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTGFP29279 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTGFP29279 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CTGFP29279 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTGFP29279 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CTGFP29279 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTGFP29279 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.37■□□□□ 0.37
CTGFP29279 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTGFP29279 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.36■□□□□ 0.37
CTGFP29279 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CTGFP29279 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.36■□□□□ 0.37
CTGFP29279 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTGFP29279 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CTGFP29279 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTGFP29279 RPSAP31-201ENST00000416648 895 ntBASIC17.36■□□□□ 0.37
CTGFP29279 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC17.36■□□□□ 0.37
CTGFP29279 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CTGFP29279 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.36■□□□□ 0.37
CTGFP29279 AC087045.2-201ENST00000606279 1003 ntBASIC17.36■□□□□ 0.37
CTGFP29279 AC090164.2-201ENST00000611487 516 ntBASIC17.36■□□□□ 0.37
CTGFP29279 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.36■□□□□ 0.37
CTGFP29279 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.36■□□□□ 0.37
CTGFP29279 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTGFP29279 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CTGFP29279 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTGFP29279 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTGFP29279 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.36■□□□□ 0.37
CTGFP29279 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTGFP29279 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTGFP29279 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.36■□□□□ 0.37
CTGFP29279 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTGFP29279 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CTGFP29279 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTGFP29279 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
CTGFP29279 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTGFP29279 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CTGFP29279 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms