Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1EP28566 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1EP28566 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1EP28566 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.14■□□□□ 0.01
HTR1EP28566 GK-202ENST00000378941 458 ntTSL 3 BASIC15.14■□□□□ 0.01
HTR1EP28566 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1EP28566 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.14■□□□□ 0.01
HTR1EP28566 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HTR1EP28566 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1EP28566 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.14■□□□□ 0.01
HTR1EP28566 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.14■□□□□ 0.01
HTR1EP28566 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1EP28566 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1EP28566 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.14■□□□□ 0.01
HTR1EP28566 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1EP28566 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1EP28566 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1EP28566 AC012645.4-201ENST00000610691 1061 ntBASIC15.14■□□□□ 0.01
HTR1EP28566 AC026120.1-201ENST00000611536 926 ntBASIC15.14■□□□□ 0.01
HTR1EP28566 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1EP28566 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1EP28566 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.14■□□□□ 0.01
HTR1EP28566 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1EP28566 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1EP28566 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1EP28566 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1EP28566 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1EP28566 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1EP28566 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1EP28566 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1EP28566 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.13■□□□□ 0.01
HTR1EP28566 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.13■□□□□ 0.01
HTR1EP28566 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HTR1EP28566 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
HTR1EP28566 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 AL589702.1-201ENST00000641229 1509 ntBASIC15.13■□□□□ 0.01
HTR1EP28566 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.13■□□□□ 0.01
HTR1EP28566 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.13■□□□□ 0.01
HTR1EP28566 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.13■□□□□ 0.01
HTR1EP28566 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.13■□□□□ 0.01
HTR1EP28566 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
HTR1EP28566 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.13■□□□□ 0.01
HTR1EP28566 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HTR1EP28566 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.13■□□□□ 0.01
HTR1EP28566 AL671277.1-201ENST00000429656 993 ntBASIC15.13■□□□□ 0.01
HTR1EP28566 SPDYE11-202ENST00000450699 704 ntBASIC15.13■□□□□ 0.01
HTR1EP28566 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HTR1EP28566 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.13■□□□□ 0.01
HTR1EP28566 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.13■□□□□ 0.01
HTR1EP28566 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.13■□□□□ 0.01
HTR1EP28566 FAM86C2P-203ENST00000528684 1004 ntBASIC15.13■□□□□ 0.01
HTR1EP28566 SPDYE9P-201ENST00000570642 692 ntBASIC15.13■□□□□ 0.01
HTR1EP28566 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.13■□□□□ 0.01
HTR1EP28566 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.13■□□□□ 0.01
HTR1EP28566 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.13■□□□□ 0.01
HTR1EP28566 SPDYE10P-202ENST00000612005 668 ntBASIC15.13■□□□□ 0.01
HTR1EP28566 SPDYE8P-202ENST00000612377 668 ntBASIC15.13■□□□□ 0.01
HTR1EP28566 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
HTR1EP28566 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.13■□□□□ 0.01
HTR1EP28566 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.13■□□□□ 0.01
HTR1EP28566 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.13■□□□□ 0.01
HTR1EP28566 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.13■□□□□ 0.01
HTR1EP28566 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
HTR1EP28566 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 AC009090.5-201ENST00000624886 2285 ntBASIC15.13■□□□□ 0.01
HTR1EP28566 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTR1EP28566 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
HTR1EP28566 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1EP28566 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
HTR1EP28566 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1EP28566 PKD1P5-201ENST00000532415 10291 ntBASIC15.12■□□□□ 0.01
HTR1EP28566 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1EP28566 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.12■□□□□ 0.01
HTR1EP28566 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
HTR1EP28566 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HTR1EP28566 AC005089.1-201ENST00000619486 2241 ntBASIC15.12■□□□□ 0.01
HTR1EP28566 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.12■□□□□ 0.01
HTR1EP28566 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1EP28566 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms