Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC051619.7-201ENST00000568314 623 ntBASIC14.14□□□□□ -0.15
HLA-DOBP13765 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.14□□□□□ -0.15
HLA-DOBP13765 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DOBP13765 AC006538.3-201ENST00000612495 578 ntBASIC14.14□□□□□ -0.15
HLA-DOBP13765 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.14□□□□□ -0.15
HLA-DOBP13765 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DOBP13765 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DOBP13765 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DOBP13765 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.14□□□□□ -0.15
HLA-DOBP13765 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DOBP13765 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DOBP13765 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DOBP13765 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HLA-DOBP13765 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HLA-DOBP13765 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DOBP13765 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
HLA-DOBP13765 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DOBP13765 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DOBP13765 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HLA-DOBP13765 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HLA-DOBP13765 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
HLA-DOBP13765 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DOBP13765 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DOBP13765 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DOBP13765 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DOBP13765 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DOBP13765 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.13□□□□□ -0.15
HLA-DOBP13765 TMBIM7P-203ENST00000641617 1718 ntBASIC14.13□□□□□ -0.15
HLA-DOBP13765 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DOBP13765 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DOBP13765 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DOBP13765 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
HLA-DOBP13765 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DOBP13765 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DOBP13765 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HLA-DOBP13765 TARDBPP1-201ENST00000442013 1203 ntBASIC14.13□□□□□ -0.15
HLA-DOBP13765 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.13□□□□□ -0.15
HLA-DOBP13765 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DOBP13765 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.13□□□□□ -0.15
HLA-DOBP13765 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.13□□□□□ -0.15
HLA-DOBP13765 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DOBP13765 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DOBP13765 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.13□□□□□ -0.15
HLA-DOBP13765 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.13□□□□□ -0.15
HLA-DOBP13765 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DOBP13765 TEX28P1-201ENST00000613479 1221 ntBASIC14.13□□□□□ -0.15
HLA-DOBP13765 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HLA-DOBP13765 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.13□□□□□ -0.15
HLA-DOBP13765 TEX28P2-201ENST00000617764 1221 ntBASIC14.13□□□□□ -0.15
HLA-DOBP13765 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.13□□□□□ -0.15
HLA-DOBP13765 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DOBP13765 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DOBP13765 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DOBP13765 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
HLA-DOBP13765 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DOBP13765 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DOBP13765 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HLA-DOBP13765 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DOBP13765 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.13□□□□□ -0.15
HLA-DOBP13765 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HLA-DOBP13765 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DOBP13765 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DOBP13765 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DOBP13765 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DOBP13765 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DOBP13765 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DOBP13765 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DOBP13765 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DOBP13765 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 FO538757.1-201ENST00000623083 1397 ntBASIC14.12□□□□□ -0.15
HLA-DOBP13765 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DOBP13765 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DOBP13765 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DOBP13765 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DOBP13765 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DOBP13765 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DOBP13765 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DOBP13765 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 HLA-V-204ENST00000476601 1289 ntBASIC14.12□□□□□ -0.15
HLA-DOBP13765 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DOBP13765 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 AC015911.4-201ENST00000588022 1070 ntBASIC14.12□□□□□ -0.15
HLA-DOBP13765 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DOBP13765 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms