Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP2P08253 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP2P08253 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP2P08253 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP2P08253 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
MMP2P08253 CLK3P2-201ENST00000427566 1453 ntBASIC15.79■□□□□ 0.12
MMP2P08253 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP2P08253 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
MMP2P08253 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP2P08253 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP2P08253 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
MMP2P08253 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP2P08253 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
MMP2P08253 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.79■□□□□ 0.12
MMP2P08253 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.79■□□□□ 0.12
MMP2P08253 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.79■□□□□ 0.12
MMP2P08253 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.79■□□□□ 0.12
MMP2P08253 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP2P08253 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP2P08253 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
MMP2P08253 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.79■□□□□ 0.12
MMP2P08253 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP2P08253 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.79■□□□□ 0.12
MMP2P08253 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.79■□□□□ 0.12
MMP2P08253 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.79■□□□□ 0.12
MMP2P08253 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.79■□□□□ 0.12
MMP2P08253 TSPY16P-201ENST00000449843 468 ntBASIC15.79■□□□□ 0.12
MMP2P08253 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.79■□□□□ 0.12
MMP2P08253 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.79■□□□□ 0.12
MMP2P08253 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP2P08253 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.79■□□□□ 0.12
MMP2P08253 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.79■□□□□ 0.12
MMP2P08253 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP2P08253 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
MMP2P08253 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP2P08253 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP2P08253 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP2P08253 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP2P08253 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP2P08253 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
MMP2P08253 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP2P08253 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP2P08253 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP2P08253 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP2P08253 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP2P08253 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP2P08253 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
MMP2P08253 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
MMP2P08253 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP2P08253 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP2P08253 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
MMP2P08253 AC006486.2-201ENST00000624246 2199 ntBASIC15.78■□□□□ 0.12
MMP2P08253 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP2P08253 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MMP2P08253 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.78■□□□□ 0.12
MMP2P08253 SPDYE19P-201ENST00000338590 713 ntBASIC15.78■□□□□ 0.12
MMP2P08253 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
MMP2P08253 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
MMP2P08253 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP2P08253 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP2P08253 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
MMP2P08253 HMGN1P19-201ENST00000436976 333 ntBASIC15.78■□□□□ 0.12
MMP2P08253 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.78■□□□□ 0.12
MMP2P08253 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP2P08253 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.78■□□□□ 0.12
MMP2P08253 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
MMP2P08253 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.78■□□□□ 0.12
MMP2P08253 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MMP2P08253 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP2P08253 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP2P08253 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP2P08253 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MMP2P08253 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MMP2P08253 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.78■□□□□ 0.12
MMP2P08253 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.78■□□□□ 0.12
MMP2P08253 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MMP2P08253 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP2P08253 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MMP2P08253 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP2P08253 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
MMP2P08253 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP2P08253 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MMP2P08253 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP2P08253 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP2P08253 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
MMP2P08253 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.77■□□□□ 0.12
MMP2P08253 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP2P08253 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP2P08253 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP2P08253 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
MMP2P08253 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.77■□□□□ 0.12
MMP2P08253 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.77■□□□□ 0.12
MMP2P08253 AC144831.1-201ENST00000573312 2656 ntBASIC15.77■□□□□ 0.12
MMP2P08253 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MMP2P08253 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP2P08253 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.77■□□□□ 0.12
MMP2P08253 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP2P08253 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP2P08253 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.77■□□□□ 0.12
MMP2P08253 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms