Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RETP07949 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RETP07949 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.87■□□□□ 0.13
RETP07949 AL596257.1-201ENST00000641463 2694 ntBASIC15.87■□□□□ 0.13
RETP07949 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.87■□□□□ 0.13
RETP07949 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RETP07949 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RETP07949 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RETP07949 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RETP07949 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.87■□□□□ 0.13
RETP07949 AC016694.1-201ENST00000434179 700 ntBASIC15.87■□□□□ 0.13
RETP07949 HIST3H2BA-201ENST00000436555 524 ntBASIC15.87■□□□□ 0.13
RETP07949 IGHJ2P-201ENST00000454480 60 ntBASIC15.87■□□□□ 0.13
RETP07949 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RETP07949 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.87■□□□□ 0.13
RETP07949 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RETP07949 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.87■□□□□ 0.13
RETP07949 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.87■□□□□ 0.13
RETP07949 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RETP07949 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RETP07949 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RETP07949 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.87■□□□□ 0.13
RETP07949 DUX4L45-201ENST00000566406 1057 ntBASIC15.87■□□□□ 0.13
RETP07949 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
RETP07949 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.87■□□□□ 0.13
RETP07949 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.87■□□□□ 0.13
RETP07949 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RETP07949 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RETP07949 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
RETP07949 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RETP07949 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RETP07949 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.87■□□□□ 0.13
RETP07949 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RETP07949 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RETP07949 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
RETP07949 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RETP07949 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RETP07949 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.87■□□□□ 0.13
RETP07949 Z97205.2-201ENST00000564697 1639 ntBASIC15.86■□□□□ 0.13
RETP07949 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.86■□□□□ 0.13
RETP07949 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.86■□□□□ 0.13
RETP07949 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RETP07949 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RETP07949 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RETP07949 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.86■□□□□ 0.13
RETP07949 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.86■□□□□ 0.13
RETP07949 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RETP07949 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.86■□□□□ 0.13
RETP07949 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.86■□□□□ 0.13
RETP07949 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 AC009486.1-201ENST00000569860 813 ntBASIC15.86■□□□□ 0.13
RETP07949 BRI3BPP1-201ENST00000594224 787 ntBASIC15.86■□□□□ 0.13
RETP07949 MIR6727-201ENST00000620702 65 ntBASIC15.86■□□□□ 0.13
RETP07949 AL158212.4-201ENST00000624062 1286 ntBASIC15.86■□□□□ 0.13
RETP07949 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RETP07949 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RETP07949 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RETP07949 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.86■□□□□ 0.13
RETP07949 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.86■□□□□ 0.13
RETP07949 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RETP07949 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RETP07949 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.86■□□□□ 0.13
RETP07949 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
RETP07949 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.85■□□□□ 0.13
RETP07949 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.85■□□□□ 0.13
RETP07949 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.85■□□□□ 0.13
RETP07949 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RETP07949 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.85■□□□□ 0.13
RETP07949 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RETP07949 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RETP07949 SNX33P1-201ENST00000592116 1762 ntBASIC15.85■□□□□ 0.13
RETP07949 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RETP07949 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RETP07949 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.85■□□□□ 0.13
RETP07949 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms