Protein–RNA interactions for Protein: P02788

LTF, Lactotransferrin, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTFP02788 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.45■□□□□ 0.22
LTFP02788 AC138969.3-201ENST00000546612 1459 ntBASIC16.45■□□□□ 0.22
LTFP02788 AC138932.2-201ENST00000548268 1459 ntBASIC16.45■□□□□ 0.22
LTFP02788 AC126755.4-201ENST00000549796 1459 ntBASIC16.45■□□□□ 0.22
LTFP02788 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LTFP02788 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LTFP02788 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LTFP02788 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LTFP02788 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.45■□□□□ 0.22
LTFP02788 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LTFP02788 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
LTFP02788 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LTFP02788 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LTFP02788 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LTFP02788 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.45■□□□□ 0.22
LTFP02788 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LTFP02788 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
LTFP02788 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LTFP02788 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LTFP02788 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LTFP02788 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LTFP02788 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LTFP02788 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LTFP02788 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LTFP02788 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
LTFP02788 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LTFP02788 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.44■□□□□ 0.22
LTFP02788 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LTFP02788 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.44■□□□□ 0.22
LTFP02788 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LTFP02788 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LTFP02788 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.44■□□□□ 0.22
LTFP02788 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.44■□□□□ 0.22
LTFP02788 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.44■□□□□ 0.22
LTFP02788 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.44■□□□□ 0.22
LTFP02788 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LTFP02788 AC007541.1-201ENST00000570282 1469 ntBASIC16.44■□□□□ 0.22
LTFP02788 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.44■□□□□ 0.22
LTFP02788 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LTFP02788 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LTFP02788 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.44■□□□□ 0.22
LTFP02788 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.44■□□□□ 0.22
LTFP02788 MEP1AP4-201ENST00000423244 1087 ntBASIC16.44■□□□□ 0.22
LTFP02788 DFFBP1-201ENST00000433250 979 ntBASIC16.44■□□□□ 0.22
LTFP02788 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.44■□□□□ 0.22
LTFP02788 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.44■□□□□ 0.22
LTFP02788 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.44■□□□□ 0.22
LTFP02788 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.44■□□□□ 0.22
LTFP02788 AC055876.2-201ENST00000531834 546 ntBASIC16.44■□□□□ 0.22
LTFP02788 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.44■□□□□ 0.22
LTFP02788 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.44■□□□□ 0.22
LTFP02788 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.44■□□□□ 0.22
LTFP02788 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
LTFP02788 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.44■□□□□ 0.22
LTFP02788 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.44■□□□□ 0.22
LTFP02788 AL391069.4-201ENST00000609583 481 ntBASIC16.44■□□□□ 0.22
LTFP02788 AL158212.4-201ENST00000624062 1286 ntBASIC16.44■□□□□ 0.22
LTFP02788 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LTFP02788 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LTFP02788 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.44■□□□□ 0.22
LTFP02788 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LTFP02788 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LTFP02788 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LTFP02788 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LTFP02788 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.44■□□□□ 0.22
LTFP02788 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LTFP02788 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
LTFP02788 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.44■□□□□ 0.22
LTFP02788 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LTFP02788 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LTFP02788 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LTFP02788 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LTFP02788 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LTFP02788 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LTFP02788 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LTFP02788 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.43■□□□□ 0.22
LTFP02788 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.43■□□□□ 0.22
LTFP02788 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.43■□□□□ 0.22
LTFP02788 AC127383.1-201ENST00000444697 1800 ntBASIC16.43■□□□□ 0.22
LTFP02788 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.43■□□□□ 0.22
LTFP02788 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.43■□□□□ 0.22
LTFP02788 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LTFP02788 SLC7A15P-201ENST00000424028 1363 ntBASIC16.43■□□□□ 0.22
LTFP02788 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.43■□□□□ 0.22
LTFP02788 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LTFP02788 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LTFP02788 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LTFP02788 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LTFP02788 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LTFP02788 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LTFP02788 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LTFP02788 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LTFP02788 PIN1P1-201ENST00000412108 996 ntBASIC16.43■□□□□ 0.22
LTFP02788 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.43■□□□□ 0.22
LTFP02788 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LTFP02788 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.43■□□□□ 0.22
LTFP02788 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.43■□□□□ 0.22
LTFP02788 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.43■□□□□ 0.22
LTFP02788 RARRES2P5-201ENST00000564013 466 ntBASIC16.43■□□□□ 0.22
LTFP02788 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms