Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CLDN11O75508 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
CLDN11O75508 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CLDN11O75508 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.02■□□□□ 0.15
CLDN11O75508 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CLDN11O75508 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN11O75508 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN11O75508 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN11O75508 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN11O75508 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN11O75508 CU639417.3-201ENST00000624240 1404 ntBASIC16.02■□□□□ 0.15
CLDN11O75508 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CLDN11O75508 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN11O75508 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CLDN11O75508 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.02■□□□□ 0.15
CLDN11O75508 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CLDN11O75508 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN11O75508 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN11O75508 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN11O75508 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN11O75508 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN11O75508 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN11O75508 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN11O75508 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN11O75508 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.01■□□□□ 0.15
CLDN11O75508 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN11O75508 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.01■□□□□ 0.15
CLDN11O75508 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN11O75508 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN11O75508 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.01■□□□□ 0.15
CLDN11O75508 AL049840.4-201ENST00000602422 811 ntBASIC16.01■□□□□ 0.15
CLDN11O75508 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN11O75508 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CLDN11O75508 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN11O75508 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN11O75508 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN11O75508 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN11O75508 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN11O75508 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN11O75508 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN11O75508 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN11O75508 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN11O75508 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CLDN11O75508 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CLDN11O75508 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN11O75508 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN11O75508 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN11O75508 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16■□□□□ 0.15
CLDN11O75508 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16■□□□□ 0.15
CLDN11O75508 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN11O75508 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16■□□□□ 0.15
CLDN11O75508 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN11O75508 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN11O75508 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16■□□□□ 0.15
CLDN11O75508 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN11O75508 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN11O75508 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN11O75508 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN11O75508 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16■□□□□ 0.15
CLDN11O75508 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN11O75508 NME2P1-201ENST00000426182 414 ntBASIC16■□□□□ 0.15
CLDN11O75508 AC134915.1-201ENST00000426461 574 ntBASIC16■□□□□ 0.15
CLDN11O75508 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16■□□□□ 0.15
CLDN11O75508 RN7SL752P-201ENST00000463779 287 ntBASIC16■□□□□ 0.15
CLDN11O75508 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16■□□□□ 0.15
CLDN11O75508 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16■□□□□ 0.15
CLDN11O75508 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN11O75508 AC011495.1-201ENST00000498085 584 ntBASIC16■□□□□ 0.15
CLDN11O75508 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN11O75508 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16■□□□□ 0.15
CLDN11O75508 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16■□□□□ 0.15
CLDN11O75508 CR383656.12-201ENST00000549567 513 ntBASIC16■□□□□ 0.15
CLDN11O75508 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16■□□□□ 0.15
CLDN11O75508 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN11O75508 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16■□□□□ 0.15
CLDN11O75508 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16■□□□□ 0.15
CLDN11O75508 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN11O75508 WFDC1-204ENST00000613603 549 ntBASIC16■□□□□ 0.15
CLDN11O75508 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16■□□□□ 0.15
CLDN11O75508 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN11O75508 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CLDN11O75508 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN11O75508 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN11O75508 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16■□□□□ 0.15
CLDN11O75508 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN11O75508 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16■□□□□ 0.15
CLDN11O75508 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16■□□□□ 0.15
CLDN11O75508 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CLDN11O75508 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN11O75508 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN11O75508 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16■□□□□ 0.15
CLDN11O75508 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN11O75508 AC105250.1-201ENST00000509378 2057 ntBASIC15.99■□□□□ 0.15
CLDN11O75508 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN11O75508 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDN11O75508 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN11O75508 INTS4P2-202ENST00000614726 2019 ntBASIC15.99■□□□□ 0.15
CLDN11O75508 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN11O75508 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN11O75508 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms